General Information of Drug Transporter (DT)
DT ID DTD0151 Transporter Info
Gene Name SLC22A4
Transporter Name Organic cation/carnitine transporter 1
Gene ID
6583
UniProt ID
Q9H015

Transcriptional Regulation of This DT (TSR)

TF Superclass1: Basic domains

      Class1.1: Basic leucine zipper factors

Click to Show/Hide the Full List of 9 TF(s) Regulating This DT

        ATF3 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Direct binding to SLC22A4 gene [1]

TF Protein Name

Cyclic AMP-dependent transcription factor ATF-3 Transcription Factor Info

Tissue

Bone marrow; Colon

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

Cyclic AMP-dependent transcription factor ATF-3 (ATF3) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

        CEBPA 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Direct binding to SLC22A4 gene [2]

TF Protein Name

CCAAT/enhancer-binding protein alpha Transcription Factor Info

Tissue

Blood; Liver

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

CCAAT/enhancer-binding protein alpha (CEBPA) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

        CEBPB 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Direct binding to SLC22A4 gene [3]

TF Protein Name

CCAAT/enhancer-binding protein beta Transcription Factor Info

Tissue

Bone

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

CCAAT/enhancer-binding protein beta (CEBPB) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

        CREB1 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Direct binding to SLC22A4 gene [4]

TF Protein Name

Cyclic AMP-responsive element-binding protein 1 Transcription Factor Info

Tissue

Bone marrow; Liver

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

Cyclic AMP-responsive element-binding protein 1 (CREB1) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

        FOSL1 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Direct binding to SLC22A4 gene [3]

TF Protein Name

Fos-related antigen 1 Transcription Factor Info

Tissue

Bone marrow; Breast; Colon

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

Fos-related antigen 1 (FOSL1) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

        FOSL2 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Direct binding to SLC22A4 gene [1]

TF Protein Name

Fos-related antigen 2 Transcription Factor Info

Tissue

Brain; Breast; Liver; Lung

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

Fos-related antigen 2 (FOSL2) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

        JUNB 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Direct binding to SLC22A4 gene [4]

TF Protein Name

Transcription factor JunB Transcription Factor Info

Tissue

Aorta

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

Transcription factor JunB (JUNB) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

        JUND 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Direct binding to SLC22A4 gene [1]

TF Protein Name

Transcription factor JunD Transcription Factor Info

Tissue

Blood; Bone marrow; Brain; Breast; Cervix; Colon; Coronary artery; Embryo; Liver; Lung

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

Transcription factor JunD (JUND) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

        NFE2 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Direct binding to SLC22A4 gene [2]

TF Protein Name

Transcription factor NF-E2 45 kDa subunit Transcription Factor Info

Tissue

Blood; Liver

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

Transcription factor NF-E2 45 kDa subunit (NFE2) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

      Class1.2: Basic helix-loop-helix factors

Click to Show/Hide the Full List of 3 TF(s) Regulating This DT

        ARNT 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Direct binding to SLC22A4 gene [4]

TF Protein Name

Aryl hydrocarbon receptor nuclear translocator Transcription Factor Info

Tissue

Breast

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

Aryl hydrocarbon receptor nuclear translocator (ARNT) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

        TCF21 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Direct binding to SLC22A4 gene [2]

TF Protein Name

Transcription factor 21 Transcription Factor Info

Tissue

Coronary artery

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

Transcription factor 21 (TCF21) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

        TCF3 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Direct binding to SLC22A4 gene [3]

TF Protein Name

Transcription factor E2-alpha Transcription Factor Info

Tissue

Blood

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

Transcription factor E2-alpha (TCF3) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

      Class1.3: Basic helix-span-helix factors

Click to Show/Hide the Full List of 2 TF(s) Regulating This DT

        TFAP2A 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Direct binding to SLC22A4 gene [2]

TF Protein Name

Transcription factor AP-2-alpha Transcription Factor Info

Tissue

Breast; Cervix

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

Transcription factor AP-2-alpha (TFAP2A) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

        TFAP2C 

Click to Show/Hide to Show 2 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Activation of SLC22A4 gene in breast cancer condition [5]

TF Protein Name

Transcription factor AP-2 gamma Transcription Factor Info

Studied Phenotype

.

Related DT Changes

Up regulating

Detailed Description

Transcription factor AP-2 gamma (TFAP2C) has been reported to activate the transcription of SLC22A4 gene in breast cancer condition, which leads to an increased expression of the drug transporter Organic cation/carnitine transporter 1.

       Transcriptional Phenomenon2

Direct binding to SLC22A4 gene [3]

TF Protein Name

Transcription factor AP-2 gamma Transcription Factor Info

Tissue

Breast; Cervix; Skin

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

Transcription factor AP-2 gamma (TFAP2C) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

TF Superclass2: Zinc-coordinating DNA-binding domains

      Class2.1: Nuclear receptors with C4 zinc fingers

Click to Show/Hide the Full List of 3 TF(s) Regulating This DT

        ESR1 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Direct binding to SLC22A4 gene [4]

TF Protein Name

Estrogen receptor Transcription Factor Info

Tissue

Breast

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

Estrogen receptor (ESR1) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

        HNF4A 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Binding to SLC22A4 gene in health condition [6]

TF Protein Name

Hepatocyte nuclear factor 4-alpha Transcription Factor Info

Studied Phenotype

.

Related DT Changes

Direct regulating

Detailed Description

Hepatocyte nuclear factor 4-alpha (HNF4A) has been reported to bind to the transcription of SLC22A4 gene in health condition, which leads to an affected expression of the drug transporter Organic cation/carnitine transporter 1.

        NR2F2 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Direct binding to SLC22A4 gene [3]

TF Protein Name

COUP transcription factor 2 Transcription Factor Info

Tissue

Bone marrow; Breast

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

COUP transcription factor 2 (NR2F2) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

      Class2.2: Other C4 zinc finger-type factors

Click to Show/Hide the Full List of 2 TF(s) Regulating This DT

        GATA1 

Click to Show/Hide to Show 2 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Binding to SLC22A4 gene in hematopoiesis condition [7]

TF Protein Name

Erythroid transcription factor Transcription Factor Info

Studied Phenotype

.

Related DT Changes

Direct regulating

Detailed Description

Erythroid transcription factor (GATA1) has been reported to bind to the transcription of SLC22A4 gene in hematopoiesis condition, which leads to an affected expression of the drug transporter Organic cation/carnitine transporter 1.

       Transcriptional Phenomenon2

Direct binding to SLC22A4 gene [1]

TF Protein Name

Erythroid transcription factor Transcription Factor Info

Tissue

Blood; Bone marrow

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

Erythroid transcription factor (GATA1) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

        GATA2 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Binding to SLC22A4 gene in hematopoiesis condition [7]

TF Protein Name

Endothelial transcription factor GATA-2 Transcription Factor Info

Studied Phenotype

.

Related DT Changes

Direct regulating

Detailed Description

Endothelial transcription factor GATA-2 (GATA2) has been reported to bind to the transcription of SLC22A4 gene in hematopoiesis condition, which leads to an affected expression of the drug transporter Organic cation/carnitine transporter 1.

      Class2.3: C2H2 zinc finger factors

Click to Show/Hide the Full List of 9 TF(s) Regulating This DT

        CTCF 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Direct binding to SLC22A4 gene [3]

TF Protein Name

Transcriptional repressor CTCF Transcription Factor Info

Tissue

Brain

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

Transcriptional repressor CTCF (CTCF) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

        EGR1 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Binding to SLC22A4 gene in erythroleukemia condition [8]

TF Protein Name

Early growth response protein 1 Transcription Factor Info

Studied Phenotype

.

Related DT Changes

Direct regulating

Detailed Description

Early growth response protein 1 (EGR1) has been reported to bind to the transcription of SLC22A4 gene in erythroleukemia condition, which leads to an affected expression of the drug transporter Organic cation/carnitine transporter 1.

        GLIS1 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Direct binding to SLC22A4 gene [4]

TF Protein Name

Zinc finger protein GLIS1 Transcription Factor Info

Tissue

Blood; Colon

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

Zinc finger protein GLIS1 (GLIS1) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

        KLF4 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Direct binding to SLC22A4 gene [2]

TF Protein Name

Krueppel-like factor 4 Transcription Factor Info

Tissue

Foreskin; Pancreatic ductal; Skin

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

Krueppel-like factor 4 (KLF4) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

        KLF5 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Direct binding to SLC22A4 gene [1]

TF Protein Name

Krueppel-like factor 5 Transcription Factor Info

Tissue

Colon; Pancreatic ductal

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

Krueppel-like factor 5 (KLF5) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

        KLF9 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Direct binding to SLC22A4 gene [2]

TF Protein Name

Krueppel-like factor 9 Transcription Factor Info

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

Krueppel-like factor 9 (KLF9) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

        MAZ 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Direct binding to SLC22A4 gene [3]

TF Protein Name

Myc-associated zinc finger protein Transcription Factor Info

Tissue

Blood; Bone marrow; Cervix; Liver; Lung

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

Myc-associated zinc finger protein (MAZ) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

        ZBTB7B 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Direct binding to SLC22A4 gene [4]

TF Protein Name

Zinc finger and BTB domain-containing protein 7B Transcription Factor Info

Tissue

Colon

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

Zinc finger and BTB domain-containing protein 7B (ZBTB7B) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

        ZNF263 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Direct binding to SLC22A4 gene [1]

TF Protein Name

Zinc finger protein 263 Transcription Factor Info

Tissue

Bone marrow; Kidney

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

Zinc finger protein 263 (ZNF263) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

TF Superclass3: Helix-turn-helix domains

      Class3.1: Homeo domain factors

Click to Show/Hide the Full List of 3 TF(s) Regulating This DT

        CUX1 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Activation of SLC22A4 gene in multiple human cancer types condition [9]

TF Protein Name

Homeobox protein cut-like 1 Transcription Factor Info

Studied Phenotype

.

Related DT Changes

Up regulating

Detailed Description

Homeobox protein cut-like 1 (CUX1) has been reported to activate the transcription of SLC22A4 gene in multiple human cancer types condition, which leads to an increased expression of the drug transporter Organic cation/carnitine transporter 1.

        HNF1B 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Activation of SLC22A4 gene in renal cysts condition [10]

TF Protein Name

Hepatocyte nuclear factor 1-beta Transcription Factor Info

Studied Phenotype

Renal cysts [ICD11: GB80]

Tissue

Kidney

Related DT Changes

Up regulating

Experimental Material

Zebrafish TgPT::EGFP)

Detailed Description

Hepatocyte nuclear factor 1-beta (HNF1B) has been reported to activate the transcription of SLC22A4 gene in renal cysts condition, which leads to an increased expression of the drug transporter Organic cation/carnitine transporter 1.

        PBX3 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Direct binding to SLC22A4 gene [2]

TF Protein Name

Pre-B-cell leukemia transcription factor 3 Transcription Factor Info

Tissue

Lung

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

Pre-B-cell leukemia transcription factor 3 (PBX3) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

      Class3.3: Fork head / winged helix factors

Click to Show/Hide the Full List of 7 TF(s) Regulating This DT

        E2F1 

Click to Show/Hide to Show 2 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Binding to SLC22A4 gene in health condition [11]

TF Protein Name

Transcription factor E2F1 Transcription Factor Info

Studied Phenotype

.

Related DT Changes

Direct regulating

Detailed Description

Transcription factor E2F1 (E2F1) has been reported to bind to the transcription of SLC22A4 gene in health condition, which leads to an affected expression of the drug transporter Organic cation/carnitine transporter 1.

       Transcriptional Phenomenon2

Direct binding to SLC22A4 gene [1]

TF Protein Name

Transcription factor E2F1 Transcription Factor Info

Tissue

Mesenchymal

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

Transcription factor E2F1 (E2F1) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

        E2F6 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Direct binding to SLC22A4 gene [2]

TF Protein Name

Transcription factor E2F6 Transcription Factor Info

Tissue

Bone marrow; Cervix; Embryo; Lung

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

Transcription factor E2F6 (E2F6) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

        FOXA1 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Direct binding to SLC22A4 gene [4]

TF Protein Name

Hepatocyte nuclear factor 3-alpha Transcription Factor Info

Tissue

Breast; Liver; Pancreatic ductal; Prostate

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

Hepatocyte nuclear factor 3-alpha (FOXA1) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

        FOXA2 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Direct binding to SLC22A4 gene [1]

TF Protein Name

Hepatocyte nuclear factor 3-beta Transcription Factor Info

Tissue

Colon

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

Hepatocyte nuclear factor 3-beta (FOXA2) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

        FOXM1 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Activation of SLC22A4 gene in breast cancer condition [12]

TF Protein Name

Forkhead box protein M1 Transcription Factor Info

Studied Phenotype

.

Related DT Changes

Up regulating

Detailed Description

Forkhead box protein M1 (FOXM1) has been reported to activate the transcription of SLC22A4 gene in breast cancer condition, which leads to an increased expression of the drug transporter Organic cation/carnitine transporter 1.

        FOXP1 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Direct binding to SLC22A4 gene [1]

TF Protein Name

Forkhead box protein P1 Transcription Factor Info

Tissue

Embryo

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

Forkhead box protein P1 (FOXP1) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

        FOXP2 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Binding to SLC22A4 gene in health condition [13]

TF Protein Name

Forkhead box protein P2 Transcription Factor Info

Studied Phenotype

.

Related DT Changes

Direct regulating

Detailed Description

Forkhead box protein P2 (FOXP2) has been reported to bind to the transcription of SLC22A4 gene in health condition, which leads to an affected expression of the drug transporter Organic cation/carnitine transporter 1.

      Class3.5: Tryptophan cluster factors

Click to Show/Hide the Full List of 5 TF(s) Regulating This DT

        ELK3 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Direct binding to SLC22A4 gene [2]

TF Protein Name

ETS domain-containing protein Elk-3 Transcription Factor Info

Tissue

Vein

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

ETS domain-containing protein Elk-3 (ELK3) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

        ETS1 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Direct binding to SLC22A4 gene [3]

TF Protein Name

Protein C-ets-1 Transcription Factor Info

Tissue

Blood; Bone; Bone marrow; Kidney; Lung; Prostate; Vein

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

Protein C-ets-1 (ETS1) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

        ETS2 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Direct binding to SLC22A4 gene [3]

TF Protein Name

Protein C-ets-2 Transcription Factor Info

Tissue

Colon

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

Protein C-ets-2 (ETS2) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

        FLI1 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Direct binding to SLC22A4 gene [4]

TF Protein Name

Friend leukemia integration 1 transcription factor Transcription Factor Info

Tissue

Blood; Mesenchymal; Vein

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

Friend leukemia integration 1 transcription factor (FLI1) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

        SPI1 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Direct binding to SLC22A4 gene [3]

TF Protein Name

Transcription factor PU.1 Transcription Factor Info

Tissue

Adrenal gland; Blood; Bone marrow; Brain; Breast; Embryo; Foreskin; Heart; Intestine; Kidney; Lung; Muscle; Penis; Placenta; Renal cortex; Renal pelvis; Skin; Spinal cord; Stomach; Testes; Umbilical cord blood

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

Transcription factor PU.1 (SPI1) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

TF Superclass4: Other all-alpha-helical DNA-binding domains

      Class4.2: Heteromeric CCAAT-binding factors

Click to Show/Hide the Full List of 1 TF(s) Regulating This DT

        NFYB 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Direct binding to SLC22A4 gene [2]

TF Protein Name

Nuclear transcription factor Y subunit beta Transcription Factor Info

Tissue

Bone marrow; Cervix

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

Nuclear transcription factor Y subunit beta (NFYB) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

TF Superclass6: Immunoglobulin fold

      Class6.1: Rel homology region factors

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        EBF1 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Direct binding to SLC22A4 gene [4]

TF Protein Name

Transcription factor COE1 Transcription Factor Info

Tissue

Blood

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

Transcription factor COE1 (EBF1) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

        NFKB1 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Activation of SLC22A4 gene in rheumatoid arthritis condition [14]

TF Protein Name

Nuclear factor NF-kappa-B p105 subunit Transcription Factor Info

Studied Phenotype

Rheumatoid arthritis [ICD11: FA20]

Tissue

Synovium

Related DT Changes

Up regulating

Experimental Material

Human rheumatoid cells (MH7A)

Detailed Description

Nuclear factor NF-kappa-B p105 subunit (NFKB1) has been reported to activate the transcription of SLC22A4 gene in rheumatoid arthritis condition, which leads to an increased expression of the drug transporter Organic cation/carnitine transporter 1.

      Class6.4: Runt domain factors

Click to Show/Hide the Full List of 1 TF(s) Regulating This DT

        RUNX1 

Click to Show/Hide to Show 2 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Activation of SLC22A4 gene in rheumatoid arthritis condition

TF Protein Name

Runt-related transcription factor 1 Transcription Factor Info

Studied Phenotype

.

Related DT Changes

Up regulating

Detailed Description

Runt-related transcription factor 1 (RUNX1) has been reported to activate the transcription of SLC22A4 gene in rheumatoid arthritis condition, which leads to an increased expression of the drug transporter Organic cation/carnitine transporter 1.

       Transcriptional Phenomenon2

Activation of SLC22A4 gene in rheumatoid arthritis condition [14]

TF Protein Name

Runt-related transcription factor 1 Transcription Factor Info

Studied Phenotype

Rheumatoid arthritis [ICD11: FA20]

Tissue

Synovium

Related DT Changes

Up regulating

Experimental Material

Human rheumatoid cells (MH7A)

Detailed Description

Runt-related transcription factor 1 (RUNX1) has been reported to activate the transcription of SLC22A4 gene in rheumatoid arthritis condition, which leads to an increased expression of the drug transporter Organic cation/carnitine transporter 1.

      Class6.7: Grainyhead domain factors

Click to Show/Hide the Full List of 1 TF(s) Regulating This DT

        GRHL2 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Direct binding to SLC22A4 gene [1]

TF Protein Name

Grainyhead-like protein 2 homolog Transcription Factor Info

Tissue

Bronchus; Ovary

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

Grainyhead-like protein 2 homolog (GRHL2) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

TF Superclass7: beta-Hairpin exposed by an alpha/beta-scaffold

      Class7.1: SMAD/NF-1 DNA-binding domain factors

Click to Show/Hide the Full List of 2 TF(s) Regulating This DT

        NFIC 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Direct binding to SLC22A4 gene [4]

TF Protein Name

Nuclear factor 1 C-type Transcription Factor Info

Tissue

Brain; Liver; Uterus

Related DT Changes

Direct regulating

Experiment method

TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

Nuclear factor 1 C-type (NFIC) can directly bind to the SLC22A4 gene, which in turn affects the expression or function of the drug transporter Organic cation/carnitine transporter 1.

        SMAD4 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon1

Binding to SLC22A4 gene in epithelial ovarian cancer condition [15]

TF Protein Name

Mothers against decapentaplegic homolog 4 Transcription Factor Info

Studied Phenotype

.

Related DT Changes

Direct regulating

Detailed Description

Mothers against decapentaplegic homolog 4 (SMAD4) has been reported to bind to the transcription of SLC22A4 gene in epithelial ovarian cancer condition, which leads to an affected expression of the drug transporter Organic cation/carnitine transporter 1.
References
1 The Encyclopedia of DNA elements (ENCODE): data portal update. Nucleic Acids Res. 2018 Jan 4;46(D1):D794-D801
2 hTFtarget: A Comprehensive Database for Regulations of Human Transcription Factors and Their Targets. Genomics Proteomics Bioinformatics. 2020 Apr;18(2):120-443. (ID:ENSG00000197208)
3 NCBI GEO: archive for functional genomics data sets--update. Nucleic Acids Res. 2013 Jan;41(D1):D991-5.
4 Closure of the NCBI SRA and implications for the long-term future of genomics data storage. Genome Biol. 2011;12(3):402.
5 Identification of primary gene targets of TFAP2C in hormone responsive breast carcinoma cells. Genes Chromosomes Cancer. 2010;49(10):948-62.
6 Mapping of HNF4alpha target genes in intestinal epithelial cells. BMC Gastroenterol. 2009;9:68.
7 Discovering hematopoietic mechanisms through genome-wide analysis of GATA factor chromatin occupancy. Mol Cell. 2009;36(4):667-81.
8 Global analysis of in vivo EGR1-binding sites in erythroleukemia cell using chromatin immunoprecipitation and massively parallel sequencing. Electrophoresis. 2010;31(17):2936-43.
9 p110 CUX1 homeodomain protein stimulates cell migration and invasion in part through a regulatory cascade culminating in the repression of E-cadherin and occludin. J Biol Chem. 2009;284(40):27701-11.
10 Transcriptional profiling of the zebrafish proximal tubule. Am J Physiol Renal Physiol. 2019 Aug 1;317(2):F478-F488.
11 Genome-wide analysis of transcription factor E2F1 mutant proteins reveals that N- and C-terminal protein interaction domains do not participate in targeting E2F1 to the human genome. J Biol Chem. 2011;286(14):11985-96.
12 FOXM1 cistrome predicts breast cancer metastatic outcome better than FOXM1 expression levels or tumor proliferation index. Breast Cancer Res Treat. 2015;154(1):23-32.
13 Microfluidic affinity and ChIP-seq analyses converge on a conserved FOXP2-binding motif in chimp and human, which enables the detection of evolutionarily novel targets. Nucleic Acids Res. 2013;41(12):5991-6004.
14 Mechanism of the regulation of organic cation/carnitine transporter 1 (SLC22A4) by rheumatoid arthritis-associated transcriptional factor RUNX1 and inflammatory cytokines. Drug Metab Dispos. 2007 Mar;35(3):394-401.
15 ChIP-seq defined genome-wide map of TGF/SMAD4 targets: implications with clinical outcome of ovarian cancer. PLoS One. 2011;6(7):e22606.

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