Modelled Stucture
Method:Homology modeling
Teplate PDB:6J8G_A_A
Identity:99.33%
Minimized Score:-3418.806
Detail: Structure Info
Detail Information of Inter-species Structural Difference
| General Information of Drug Transporter (DT) | |||||
|---|---|---|---|---|---|
| DT ID | DTD0529 Transporter Info | ||||
| Gene Name | SCN9A | ||||
| Protein Name | Voltage-gated sodium channel alpha Nav1.7 | ||||
| Gene ID | |||||
| UniProt ID | |||||
| 3D Structure |
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| Inter-species Structural Differences (ISD) | |||||
| Mus musculus (Mouse) | |||||
| Gene Name | Scn9a | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method:Homology modeling Teplate PDB:6J8G_A Sequence Length:1984 Identity:92.857% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -3346.124 kcal/mol | |||
| Ramachandra Favored | Medium |
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| QMEANBrane Quality | Medium |
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| Ramachandran Plot |
Ramz Z Score:-0.82 ±0.17 Residues in Favored Region:1900 Ramachandran favored:95.86% Number of Outliers:14 Ramachandran outliers:0.71% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score:0.72 |
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| Click to Save Local Quality Plot in PNG Format | |||||
| Rattus norvegicus (Rat) | |||||
| Gene Name | Scn9a | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method:Homology modeling Teplate PDB:6J8G_A Sequence Length:1984 Identity:92.656% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -3354.144 kcal/mol | |||
| Ramachandra Favored | Medium |
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| QMEANBrane Quality | Medium |
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| Ramachandran Plot |
Ramz Z Score:-0.87 ±0.18 Residues in Favored Region:1903 Ramachandran favored:96.01% Number of Outliers:27 Ramachandran outliers:1.36% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score:0.72 |
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| Click to Save Local Quality Plot in PNG Format | |||||
| Oryctolagus cuniculus (Rabbit) | |||||
| Gene Name | SCN9A | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method:Homology modeling Teplate PDB:6J8G_A Sequence Length:1984 Identity:93.712% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -3391.624 kcal/mol | |||
| Ramachandra Favored | Medium |
||||
| QMEANBrane Quality | Medium |
||||
| Ramachandran Plot |
Ramz Z Score:-0.85 ±0.17 Residues in Favored Region:1903 Ramachandran favored:96.01% Number of Outliers:18 Ramachandran outliers:0.91% |
||||
| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score:0.72 |
||||
| Click to Save Local Quality Plot in PNG Format | |||||
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