Modelled Stucture
Method:Homology modeling
Teplate PDB:6CAA_A
Identity:56.484%
Minimized Score:-1548.413
Detail: Structure Info
Detail Information of Inter-species Structural Difference
| General Information of Drug Transporter (DT) | |||||
|---|---|---|---|---|---|
| DT ID | DTD0388 Transporter Info | ||||
| Gene Name | SLC4A8 | ||||
| Protein Name | Electroneutral sodium bicarbonate exchanger 1 | ||||
| Gene ID | |||||
| UniProt ID | |||||
| 3D Structure |
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| Inter-species Structural Differences (ISD) | |||||
| Mus musculus (Mouse) | |||||
| Gene Name | Slc4a8 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method:Homology modeling Teplate PDB:6CAA_A Sequence Length:912 Identity:56.21% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -1379.191 kcal/mol | |||
| Ramachandra Favored | Poor |
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| QMEANBrane Quality | Medium |
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| Ramachandran Plot |
Ramz Z Score:-2.1 ±0.25 Residues in Favored Region:861 Ramachandran favored:94.62% Number of Outliers:7 Ramachandran outliers:0.77% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score:0.72 |
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| Click to Save Local Quality Plot in PNG Format | |||||
| Rattus norvegicus (Rat) | |||||
| Gene Name | Slc4a8 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method:Homology modeling Teplate PDB:6CAA_A Sequence Length:916 Identity:53.87% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -1565.432 kcal/mol | |||
| Ramachandra Favored | Poor |
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| QMEANBrane Quality | Medium |
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| Ramachandran Plot |
Ramz Z Score:-1.29 ±0.26 Residues in Favored Region:865 Ramachandran favored:94.64% Number of Outliers:10 Ramachandran outliers:1.09% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score:0.72 |
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| Click to Save Local Quality Plot in PNG Format | |||||
| References | |||||
| 1 | Cryo-EM structure of the sodium-driven chloride/bicarbonate exchanger NDCBE. Nat Commun. 2021;12(1):5690. | ||||
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