Detail Information of Genetic Polymorphisms
General Information of Drug Transporter (DT) | |||||
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DT ID | DTD0427 Transporter Info | ||||
Gene Name | SLC5A7 | ||||
Protein Name | High affinity choline transporter 1 | ||||
Gene ID | |||||
UniProt ID | |||||
Genetic Polymorphisms of DT (GPD) | |||||
Genetic Polymorphism | rs1013940 | ||||
Site of GPD | chr2:107992192 (GRCh38.p12) | ||||
GPD Type | SNP | ||||
Allele(s) in dbSNP | A>G | ||||
Minor Allele Frequency | A=0.9260/1832 (Global) | ||||
Genotypes AG + GG | Click to Show/Hide the Full List of Affected Drugs: 1 Drugs in Total | ||||
Vincristine | N.A. | Peripheral Nervous System Diseases | Genotypes AG + GG are associated with increased risk of Peripheral Nervous System Diseases when treated with vincristine as compared to genotype AA. | [ 1] | |
Genetic Polymorphism | rs11685873 | ||||
Site of GPD | chr2:107995063 (GRCh38.p12) | ||||
GPD Type | SNP | ||||
Allele(s) in dbSNP | G>A | ||||
Minor Allele Frequency | G=0.8560/1694 (Global) | ||||
Allele G | Click to Show/Hide the Full List of Affected Drugs: 3 Drugs in Total | ||||
Donepezil | N.A. | Peripheral Nervous System Diseases | Allele G is not associated with response to donepezil, galantamine or rivastigmine in people with Alzheimer Disease as compared to allele A. | [ 2] | |
Galantamine | N.A. | Peripheral Nervous System Diseases | Allele G is not associated with response to donepezil, galantamine or rivastigmine in people with Alzheimer Disease as compared to allele A. | [ 2] | |
Rivastigmine | N.A. | Peripheral Nervous System Diseases | Allele G is not associated with response to donepezil, galantamine or rivastigmine in people with Alzheimer Disease as compared to allele A. | [ 2] | |
Genetic Polymorphism | rs6542746 | ||||
Site of GPD | chr2:107989380 (GRCh38.p12) | ||||
GPD Type | SNP | ||||
Allele(s) in dbSNP | C>G / C>T | ||||
Minor Allele Frequency | C=0.4500/890 (Global) | ||||
Allele C | Click to Show/Hide the Full List of Affected Drugs: 3 Drugs in Total | ||||
Donepezil | N.A. | Peripheral Nervous System Diseases | Allele C is not associated with response to donepezil, galantamine or rivastigmine in people with Alzheimer Disease as compared to allele T. | [ 2] | |
Galantamine | N.A. | Peripheral Nervous System Diseases | Allele C is not associated with response to donepezil, galantamine or rivastigmine in people with Alzheimer Disease as compared to allele T. | [ 2] | |
Rivastigmine | N.A. | Peripheral Nervous System Diseases | Allele C is not associated with response to donepezil, galantamine or rivastigmine in people with Alzheimer Disease as compared to allele T. | [ 2] | |
Genetic Polymorphism | rs6720783 | ||||
Site of GPD | chr2:108006866 (GRCh38.p12) | ||||
GPD Type | SNP | ||||
Allele(s) in dbSNP | T>A / T>C / T>G | ||||
Minor Allele Frequency | T=0.5670/1122 (Global) | ||||
Allele G | Click to Show/Hide the Full List of Affected Drugs: 3 Drugs in Total | ||||
Donepezil | N.A. | Peripheral Nervous System Diseases | Allele G is not associated with response to donepezil, galantamine or rivastigmine in people with Alzheimer Disease as compared to allele T. | [ 2] | |
Galantamine | N.A. | Peripheral Nervous System Diseases | Allele G is not associated with response to donepezil, galantamine or rivastigmine in people with Alzheimer Disease as compared to allele T. | [ 2] | |
Rivastigmine | N.A. | Peripheral Nervous System Diseases | Allele G is not associated with response to donepezil, galantamine or rivastigmine in people with Alzheimer Disease as compared to allele T. | [ 2] | |
References | |||||
1 | Pharmacogenomics of Vincristine-Induced Peripheral Neuropathy Implicates Pharmacokinetic and Inherited Neuropathy Genes. Clin Pharmacol Ther. 2019 Feb;105(2):402-410. | ||||
2 | Association of the choline acetyltransferase gene with responsiveness to acetylcholinesterase inhibitors in Alzheimer's disease. Pharmacopsychiatry. 2015 May;48(3):111-7. |
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