Detail Information of Genetic Polymorphisms
General Information of Drug Transporter (DT) | |||||
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DT ID | DTD0034 Transporter Info | ||||
Gene Name | SLC18A2 | ||||
Protein Name | Vesicular amine transporter 2 | ||||
Gene ID | |||||
UniProt ID | |||||
Genetic Polymorphisms of DT (GPD) | |||||
Genetic Polymorphism | rs363341 | ||||
Site of GPD | chr10:117250954 (GRCh38.p12) | ||||
GPD Type | SNP | ||||
Allele(s) in dbSNP | C>T | ||||
Minor Allele Frequency | T=0.3982/1994 (Global) | ||||
Genotype TT | Click to Show/Hide the Full List of Affected Drugs: 3 Drugs in Total | ||||
Antipsychotics | N.A. | Drug Toxicity | Genotype TT is associated with increased risk of Drug Toxicity when treated with antipsychotics in people with Psychotic Disorders as compared to genotypes CC + CT. | [ 1] | |
Antipsychotics | N.A. | Psychotic Disorder | Genotype TT is associated with increased risk of Drug Toxicity when treated with antipsychotics in people with Psychotic Disorders as compared to genotypes CC + CT. | [ 1] | |
Antipsychotics | N.A. | Psychotic Disorders | Correlated with the increased drug toxicity risk in patients (compare with genotypes CC + CT) | [ 1] | |
Genotype CC | Click to Show/Hide the Full List of Affected Drugs: 1 Drugs in Total | ||||
Antipsychotics | N.A. | Psychotic Disorder | Patients with the CC genotype and first episode psychosis (FEP) may have a decreased risk for extrapyramidal symptoms when treated with antipsychotics as compared to patients with the TT genotype. Other genetic and clinical factors may also influence risk of extrapyramidal symptoms. | [ 1] | |
Genotype CT | Click to Show/Hide the Full List of Affected Drugs: 1 Drugs in Total | ||||
Antipsychotics | N.A. | Psychotic Disorder | Patients with the CT genotype and first episode psychosis (FEP) may have a decreased risk for extrapyramidal symptoms when treated with antipsychotics as compared to patients with the TT genotype. Other genetic and clinical factors may also influence risk of extrapyramidal symptoms. | [ 1] | |
Genetic Polymorphism | rs363225 | ||||
Site of GPD | chr10:117264991 (GRCh38.p12) | ||||
GPD Type | SNP | ||||
Allele(s) in dbSNP | C>A / C>G / C>T | ||||
Minor Allele Frequency | C=0.5960/1179 (Global) | ||||
Genotype CC | Click to Show/Hide the Full List of Affected Drugs: 2 Drugs in Total | ||||
Bupropion | N.A. | Asthma | Genotype CC is associated with increased response to bupropion in people with Depressive Disorder, Major as compared to genotypes CT + TT. | [ 2] | |
Bupropion | N.A. | Major Depressive Disorder | Genotype CC is associated with increased response to bupropion in people with Depressive Disorder, Major as compared to genotypes CT + TT. | [ 2] | |
Genotype CT | Click to Show/Hide the Full List of Affected Drugs: 1 Drugs in Total | ||||
Bupropion | N.A. | Major Depressive Disorder | Patients with the CT genotype may have a decreased response to bupropion in the treatment of major depressive disorder, as measured by a reduction in HAMD scores, as compared to patients with the CC genotype. Other genetic and clinical factors may also affect a patient's response to bupropion. | [ 2] | |
Genotype TT | Click to Show/Hide the Full List of Affected Drugs: 1 Drugs in Total | ||||
Bupropion | N.A. | Major Depressive Disorder | Patients with the TT genotype may have a decreased response to bupropion in the treatment of major depressive disorder, as measured by a reduction in HAMD scores, as compared to patients with the CC genotype. Other genetic and clinical factors may also affect a patient's response to bupropion. | [ 2] | |
Genetic Polymorphism | rs363226 | ||||
Site of GPD | chr10:117265701 (GRCh38.p12) | ||||
GPD Type | SNP | ||||
Allele(s) in dbSNP | G>A / G>C / G>T | ||||
Minor Allele Frequency | G=0.2900/573 (Global) | ||||
Genotype GG | Click to Show/Hide the Full List of Affected Drugs: 2 Drugs in Total | ||||
Bupropion | N.A. | Asthma | Genotype GG is associated with increased response to bupropion in people with Depressive Disorder, Major as compared to genotypes CC + CG. | [ 2] | |
Bupropion | N.A. | Major Depressive Disorder | Genotype GG is associated with increased response to bupropion in people with Depressive Disorder, Major as compared to genotypes CC + CG. | [ 2] | |
Genotype CC | Click to Show/Hide the Full List of Affected Drugs: 1 Drugs in Total | ||||
Bupropion | N.A. | Major Depressive Disorder | Patients with the CC genotype may have a decreased response to bupropion in the treatment of major depressive disorder, as measured by a reduction in HAMD scores, as compared to patients with the GG genotype. Other genetic and clinical factors may also affect a patient's response to bupropion. | [ 2] | |
Genotype CG | Click to Show/Hide the Full List of Affected Drugs: 1 Drugs in Total | ||||
Bupropion | N.A. | Major Depressive Disorder | Patients with the CG genotype may have a decreased response to bupropion in the treatment of major depressive disorder, as measured by a reduction in HAMD scores, as compared to patients with the GG genotype. Other genetic and clinical factors may also affect a patient's response to bupropion. | [ 2] | |
Genetic Polymorphism | rs363371 | ||||
Site of GPD | chr10:117226885 (GRCh38.p12) | ||||
GPD Type | SNP | ||||
Allele(s) in dbSNP | G>A | ||||
Minor Allele Frequency | G=0.7460/1476 (Global) | ||||
Allele A | Click to Show/Hide the Full List of Affected Drugs: 1 Drugs in Total | ||||
Citalopram | N.A. | Drug Toxicity | Allele A is not associated with response to citalopram in people with Depressive Disorder, Major as compared to allele G. | [ 3] | |
Genetic Polymorphism | rs363390 | ||||
Site of GPD | chr10:117244568 (GRCh38.p12) | ||||
GPD Type | SNP | ||||
Allele(s) in dbSNP | G>A / G>C | ||||
Minor Allele Frequency | G=0.7570/1498 (Global) | ||||
Allele C | Click to Show/Hide the Full List of Affected Drugs: 1 Drugs in Total | ||||
Citalopram | N.A. | Drug Toxicity | Allele C is not associated with response to citalopram in people with Depressive Disorder, Major as compared to allele G. | [ 3] | |
Genotypes CC + CG | Click to Show/Hide the Full List of Affected Drugs: 1 Drugs in Total | ||||
Antipsychotics | N.A. | Tardive Dyskinesia | Genotypes CC + CG is associated with increased risk of tardive dyskinesia when treated with antipsychotics in people with schizoaffective disorder and Schizophrenia as compared to genotype GG. | [ 4] | |
Genetic Polymorphism | rs363343 | ||||
Site of GPD | chr10:117255437 (GRCh38.p12) | ||||
GPD Type | SNP | ||||
Allele(s) in dbSNP | C>A | ||||
Minor Allele Frequency | C=0.3610/714 (Global) | ||||
Allele A | Click to Show/Hide the Full List of Affected Drugs: 1 Drugs in Total | ||||
Citalopram | N.A. | Drug Toxicity | Allele A is not associated with response to citalopram in people with Depressive Disorder, Major as compared to allele C. | [ 3] | |
Genetic Polymorphism | rs929493 | ||||
Site of GPD | chr10:117259615 (GRCh38.p12) | ||||
GPD Type | SNP | ||||
Allele(s) in dbSNP | C>T | ||||
Minor Allele Frequency | C=0.4140/819 (Global) | ||||
Allele C | Click to Show/Hide the Full List of Affected Drugs: 1 Drugs in Total | ||||
Citalopram | N.A. | Drug Toxicity | Allele C is not associated with response to citalopram in people with Depressive Disorder, Major as compared to allele T. | [ 3] | |
Genetic Polymorphism | rs14240 | ||||
Site of GPD | chr10:117277560 (GRCh38.p12) | ||||
GPD Type | SNP | ||||
Allele(s) in dbSNP | T>A / T>C / T>G | ||||
Minor Allele Frequency | T=0.5510/1090 (Global) | ||||
Genotype TT | Click to Show/Hide the Full List of Affected Drugs: 1 Drugs in Total | ||||
Antipsychotics | N.A. | Tardive Dyskinesia | Genotype TT is associated with increased risk of tardive dyskinesia when treated with antipsychotics in people with schizoaffective disorder and Schizophrenia as compared to genotypes CC + CT. | [ 4] | |
Genetic Polymorphism | rs363224 | ||||
Site of GPD | chr10:117263062 (GRCh38.p12) | ||||
GPD Type | SNP | ||||
Allele(s) in dbSNP | C>A / C>T | ||||
Minor Allele Frequency | C=0.5510/1090 (Global) | ||||
Genotypes AC + CC | Click to Show/Hide the Full List of Affected Drugs: 1 Drugs in Total | ||||
Antipsychotics | N.A. | Tardive Dyskinesia | Genotypes AC + CC is associated with increased risk of tardive dyskinesia when treated with antipsychotics in people with schizoaffective disorder and Schizophrenia as compared to genotype AA. | [ 4] | |
Genetic Polymorphism | rs363332 | ||||
Site of GPD | chr10:117243156 (GRCh38.p12) | ||||
GPD Type | SNP | ||||
Allele(s) in dbSNP | G>A / G>T | ||||
Minor Allele Frequency | G=0.7590/1502 (Global) | ||||
Allele A | Click to Show/Hide the Full List of Affected Drugs: 1 Drugs in Total | ||||
Opioids | N.A. | Opioid-related Disorders | Allele A is associated with increased likelihood of Opioid-Related Disorders when exposed to opioids as compared to allele G. | [ 5] | |
Genetic Polymorphism | rs363334 | ||||
Site of GPD | chr10:117245484 (GRCh38.p12) | ||||
GPD Type | SNP | ||||
Allele(s) in dbSNP | C>G | ||||
Minor Allele Frequency | C=0.6890/1363 (Global) | ||||
Allele G | Click to Show/Hide the Full List of Affected Drugs: 1 Drugs in Total | ||||
Opioids | N.A. | Opioid-related Disorders | Allele G is associated with increased likelihood of Opioid-Related Disorders when exposed to opioids. | [ 5] | |
Genetic Polymorphism | rs363338 | ||||
Site of GPD | chr10:117249878 (GRCh38.p12) | ||||
GPD Type | SNP | ||||
Allele(s) in dbSNP | C>A / C>G / C>T | ||||
Minor Allele Frequency | C=0.5390/1066 (Global) | ||||
Allele C | Click to Show/Hide the Full List of Affected Drugs: 1 Drugs in Total | ||||
Opioids | N.A. | Opioid-related Disorders | Allele C is associated with increased likelihood of Opioid-Related Disorders when exposed to opioids as compared to allele T. | [ 5] | |
References | |||||
1 | Pharmacogenetic study of antipsychotic induced acute extrapyramidal symptoms in a first episode psychosis cohort: role of dopamine, serotonin and glutamate candidate genes. Pharmacogenomics J. 2016 Oct;16(5):439-45. | ||||
2 | Analysis of 34 candidate genes in bupropion and placebo remission. Int J Neuropsychopharmacol. 2013 May;16(4):771-81. | ||||
3 | Variation in the genes encoding vesicular monoamine transporter 2 and beta-1 adrenergic receptor and antidepressant treatment outcome. Psychiatr Genet. 2008 Oct;18(5):248-51. | ||||
4 | Association study of the vesicular monoamine transporter gene SLC18A2 with tardive dyskinesia. J Psychiatr Res. 2013 Nov;47(11):1760-5. | ||||
5 | VMAT2 gene (SLC18A2) variants associated with a greater risk for developing opioid dependence. Pharmacogenomics. 2019 Apr;20(5):331-341. |
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