General Information of Drug Transporter (DT)
DT ID DTD0528 Transporter Info
Gene Name SCN8A
Transporter Name Voltage-gated sodium channel alpha Nav1.6
Gene ID
6334
UniProt ID
O95788
Epigenetic Regulations of This DT (EGR)

Methylation

  Bladder cancer

         19 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon1

Methylation of SCN8A in bladder cancer [ 1 ]

Location

5'UTR (cg08140412)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-2.61E+00 Statistic Test p-value:2.16E-11; Z-score:-1.33E+01

Methylation in Case

1.52E-01 (Median) Methylation in Control 3.96E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon2

Methylation of SCN8A in bladder cancer [ 1 ]

Location

5'UTR (cg21834754)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.17E+00 Statistic Test p-value:5.94E-04; Z-score:-6.47E+00

Methylation in Case

7.09E-01 (Median) Methylation in Control 8.33E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon3

Methylation of SCN8A in bladder cancer [ 1 ]

Location

5'UTR (cg23909029)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.56E+00 Statistic Test p-value:1.03E-03; Z-score:3.92E+00

Methylation in Case

1.44E-01 (Median) Methylation in Control 9.28E-02 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon4

Methylation of SCN8A in bladder cancer [ 1 ]

Location

5'UTR (cg16918684)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.05E+00 Statistic Test p-value:4.06E-03; Z-score:-1.46E+00

Methylation in Case

8.00E-01 (Median) Methylation in Control 8.43E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon5

Methylation of SCN8A in bladder cancer [ 1 ]

Location

TSS1500 (cg18426142)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.49E+00 Statistic Test p-value:1.56E-02; Z-score:3.71E+00

Methylation in Case

3.34E-01 (Median) Methylation in Control 2.24E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon6

Methylation of SCN8A in bladder cancer [ 1 ]

Location

TSS200 (cg01289656)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.14E+00 Statistic Test p-value:4.63E-02; Z-score:5.95E-01

Methylation in Case

3.97E-02 (Median) Methylation in Control 3.49E-02 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon7

Methylation of SCN8A in bladder cancer [ 1 ]

Location

Body (cg19055098)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-2.30E+00 Statistic Test p-value:1.02E-12; Z-score:-1.95E+01

Methylation in Case

3.49E-01 (Median) Methylation in Control 8.03E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon8

Methylation of SCN8A in bladder cancer [ 1 ]

Location

Body (cg27304952)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-2.54E+00 Statistic Test p-value:4.91E-12; Z-score:-2.25E+01

Methylation in Case

2.77E-01 (Median) Methylation in Control 7.03E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon9

Methylation of SCN8A in bladder cancer [ 1 ]

Location

Body (cg15618336)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.57E+00 Statistic Test p-value:4.08E-08; Z-score:-1.61E+01

Methylation in Case

5.28E-01 (Median) Methylation in Control 8.27E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon10

Methylation of SCN8A in bladder cancer [ 1 ]

Location

Body (cg07884867)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-2.02E+00 Statistic Test p-value:4.29E-08; Z-score:-1.42E+01

Methylation in Case

3.66E-01 (Median) Methylation in Control 7.39E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon11

Methylation of SCN8A in bladder cancer [ 1 ]

Location

Body (cg15422644)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.23E+00 Statistic Test p-value:1.73E-05; Z-score:-8.09E+00

Methylation in Case

7.04E-01 (Median) Methylation in Control 8.64E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon12

Methylation of SCN8A in bladder cancer [ 1 ]

Location

Body (cg13576200)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.27E+00 Statistic Test p-value:2.43E-05; Z-score:-8.35E+00

Methylation in Case

6.53E-01 (Median) Methylation in Control 8.27E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon13

Methylation of SCN8A in bladder cancer [ 1 ]

Location

Body (cg06100533)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.04E+00 Statistic Test p-value:5.80E-04; Z-score:-3.53E+00

Methylation in Case

8.76E-01 (Median) Methylation in Control 9.12E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon14

Methylation of SCN8A in bladder cancer [ 1 ]

Location

Body (cg15029631)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.11E+00 Statistic Test p-value:7.24E-04; Z-score:-4.29E+00

Methylation in Case

8.19E-01 (Median) Methylation in Control 9.09E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon15

Methylation of SCN8A in bladder cancer [ 1 ]

Location

Body (cg12536786)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.17E+00 Statistic Test p-value:8.23E-04; Z-score:-5.36E+00

Methylation in Case

6.99E-01 (Median) Methylation in Control 8.20E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon16

Methylation of SCN8A in bladder cancer [ 1 ]

Location

Body (cg19760651)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.26E+00 Statistic Test p-value:2.95E-03; Z-score:-2.42E+00

Methylation in Case

5.31E-01 (Median) Methylation in Control 6.70E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon17

Methylation of SCN8A in bladder cancer [ 1 ]

Location

Body (cg13843573)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.24E+00 Statistic Test p-value:8.47E-03; Z-score:-4.63E+00

Methylation in Case

5.70E-01 (Median) Methylation in Control 7.08E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon18

Methylation of SCN8A in bladder cancer [ 1 ]

Location

Body (cg06014251)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.02E+00 Statistic Test p-value:2.91E-02; Z-score:-1.02E+00

Methylation in Case

8.82E-01 (Median) Methylation in Control 9.01E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon19

Methylation of SCN8A in bladder cancer [ 1 ]

Location

3'UTR (cg20059682)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.46E+00 Statistic Test p-value:1.62E-07; Z-score:-2.63E+01

Methylation in Case

5.98E-01 (Median) Methylation in Control 8.73E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Breast cancer

         21 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon1

Methylation of SCN8A in breast cancer [ 2 ]

Location

5'UTR (cg21834754)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.06E+00 Statistic Test p-value:1.05E-03; Z-score:-8.79E-01

Methylation in Case

7.58E-01 (Median) Methylation in Control 8.00E-01 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon2

Methylation of SCN8A in breast cancer [ 2 ]

Location

5'UTR (cg23909029)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.07E+00 Statistic Test p-value:1.38E-03; Z-score:3.31E-01

Methylation in Case

8.23E-02 (Median) Methylation in Control 7.67E-02 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon3

Methylation of SCN8A in breast cancer [ 2 ]

Location

5'UTR (cg16918684)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.09E+00 Statistic Test p-value:1.72E-02; Z-score:9.43E-01

Methylation in Case

8.24E-01 (Median) Methylation in Control 7.58E-01 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon4

Methylation of SCN8A in breast cancer [ 2 ]

Location

5'UTR (cg10170677)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.03E+00 Statistic Test p-value:3.47E-02; Z-score:-8.97E-02

Methylation in Case

4.24E-02 (Median) Methylation in Control 4.37E-02 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon5

Methylation of SCN8A in breast cancer [ 2 ]

Location

TSS200 (cg22199410)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.09E+00 Statistic Test p-value:2.43E-02; Z-score:4.00E-01

Methylation in Case

6.95E-02 (Median) Methylation in Control 6.38E-02 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon6

Methylation of SCN8A in breast cancer [ 2 ]

Location

Body (cg15618336)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.18E+00 Statistic Test p-value:2.78E-13; Z-score:-2.92E+00

Methylation in Case

7.17E-01 (Median) Methylation in Control 8.43E-01 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon7

Methylation of SCN8A in breast cancer [ 2 ]

Location

Body (cg27304952)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.22E+00 Statistic Test p-value:3.11E-11; Z-score:-2.29E+00

Methylation in Case

6.29E-01 (Median) Methylation in Control 7.66E-01 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon8

Methylation of SCN8A in breast cancer [ 2 ]

Location

Body (cg21865762)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.15E+00 Statistic Test p-value:1.82E-05; Z-score:1.18E+00

Methylation in Case

6.71E-01 (Median) Methylation in Control 5.85E-01 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon9

Methylation of SCN8A in breast cancer [ 2 ]

Location

Body (cg15422644)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.10E+00 Statistic Test p-value:2.17E-04; Z-score:1.91E+00

Methylation in Case

8.66E-01 (Median) Methylation in Control 7.85E-01 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon10

Methylation of SCN8A in breast cancer [ 2 ]

Location

Body (cg05760722)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.27E+00 Statistic Test p-value:2.78E-04; Z-score:8.64E-01

Methylation in Case

3.16E-01 (Median) Methylation in Control 2.49E-01 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon11

Methylation of SCN8A in breast cancer [ 2 ]

Location

Body (cg07884867)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.20E+00 Statistic Test p-value:3.15E-04; Z-score:-1.24E+00

Methylation in Case

6.12E-01 (Median) Methylation in Control 7.33E-01 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon12

Methylation of SCN8A in breast cancer [ 2 ]

Location

Body (cg13843573)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.12E+00 Statistic Test p-value:1.12E-03; Z-score:-5.60E-01

Methylation in Case

6.82E-01 (Median) Methylation in Control 7.66E-01 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon13

Methylation of SCN8A in breast cancer [ 2 ]

Location

Body (cg13576200)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.11E+00 Statistic Test p-value:1.26E-03; Z-score:-9.03E-01

Methylation in Case

7.60E-01 (Median) Methylation in Control 8.40E-01 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon14

Methylation of SCN8A in breast cancer [ 2 ]

Location

Body (cg24946795)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.11E+00 Statistic Test p-value:1.94E-03; Z-score:4.68E-01

Methylation in Case

3.69E-01 (Median) Methylation in Control 3.33E-01 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon15

Methylation of SCN8A in breast cancer [ 2 ]

Location

Body (cg12536786)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.07E+00 Statistic Test p-value:3.43E-03; Z-score:-7.71E-01

Methylation in Case

7.85E-01 (Median) Methylation in Control 8.40E-01 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon16

Methylation of SCN8A in breast cancer [ 2 ]

Location

Body (cg06014251)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.01E+00 Statistic Test p-value:3.60E-03; Z-score:-4.08E-01

Methylation in Case

8.65E-01 (Median) Methylation in Control 8.75E-01 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon17

Methylation of SCN8A in breast cancer [ 2 ]

Location

Body (cg21974358)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.10E+00 Statistic Test p-value:5.47E-03; Z-score:3.04E-01

Methylation in Case

3.58E-01 (Median) Methylation in Control 3.24E-01 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon18

Methylation of SCN8A in breast cancer [ 2 ]

Location

Body (cg19760651)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.07E+00 Statistic Test p-value:5.73E-03; Z-score:-6.44E-01

Methylation in Case

6.68E-01 (Median) Methylation in Control 7.18E-01 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon19

Methylation of SCN8A in breast cancer [ 2 ]

Location

Body (cg06100533)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.01E+00 Statistic Test p-value:1.28E-02; Z-score:-2.53E-01

Methylation in Case

8.81E-01 (Median) Methylation in Control 8.91E-01 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon20

Methylation of SCN8A in breast cancer [ 2 ]

Location

Body (cg19156231)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.05E+00 Statistic Test p-value:4.82E-02; Z-score:1.13E-01

Methylation in Case

3.30E-01 (Median) Methylation in Control 3.15E-01 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon21

Methylation of SCN8A in breast cancer [ 2 ]

Location

3'UTR (cg20059682)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.05E+00 Statistic Test p-value:1.06E-04; Z-score:-8.59E-01

Methylation in Case

7.81E-01 (Median) Methylation in Control 8.17E-01 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Renal cell carcinoma

           6 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon1

Methylation of SCN8A in clear cell renal cell carcinoma [ 3 ]

Location

5'UTR (cg23909029)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.02E+00 Statistic Test p-value:1.21E-02; Z-score:1.07E-01

Methylation in Case

4.84E-02 (Median) Methylation in Control 4.74E-02 (Median)

Studied Phenotype

Renal cell carcinoma[ ICD-11:2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon2

Methylation of SCN8A in clear cell renal cell carcinoma [ 3 ]

Location

TSS200 (cg05861454)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.04E+00 Statistic Test p-value:1.33E-03; Z-score:4.39E-01

Methylation in Case

1.82E-02 (Median) Methylation in Control 1.74E-02 (Median)

Studied Phenotype

Renal cell carcinoma[ ICD-11:2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon3

Methylation of SCN8A in clear cell renal cell carcinoma [ 3 ]

Location

TSS200 (cg01289656)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.06E+00 Statistic Test p-value:5.49E-03; Z-score:3.64E-01

Methylation in Case

3.20E-02 (Median) Methylation in Control 3.02E-02 (Median)

Studied Phenotype

Renal cell carcinoma[ ICD-11:2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon4

Methylation of SCN8A in clear cell renal cell carcinoma [ 3 ]

Location

TSS200 (cg22349780)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.06E+00 Statistic Test p-value:1.03E-02; Z-score:5.55E-01

Methylation in Case

2.55E-02 (Median) Methylation in Control 2.42E-02 (Median)

Studied Phenotype

Renal cell carcinoma[ ICD-11:2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon5

Methylation of SCN8A in clear cell renal cell carcinoma [ 3 ]

Location

TSS200 (cg22199410)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.12E+00 Statistic Test p-value:1.21E-02; Z-score:5.92E-01

Methylation in Case

6.52E-02 (Median) Methylation in Control 5.81E-02 (Median)

Studied Phenotype

Renal cell carcinoma[ ICD-11:2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon6

Methylation of SCN8A in clear cell renal cell carcinoma [ 3 ]

Location

Body (cg19156231)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.76E+00 Statistic Test p-value:1.20E-04; Z-score:-2.71E+00

Methylation in Case

1.91E-01 (Median) Methylation in Control 3.37E-01 (Median)

Studied Phenotype

Renal cell carcinoma[ ICD-11:2C90]

Experimental Material

Patient tissue samples

  Colon cancer

           6 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon1

Methylation of SCN8A in colon adenocarcinoma [ 4 ]

Location

5'UTR (cg01213557)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.02E+00 Statistic Test p-value:1.86E-03; Z-score:-9.55E-01

Methylation in Case

8.57E-01 (Median) Methylation in Control 8.70E-01 (Median)

Studied Phenotype

Colon cancer[ ICD-11:2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon2

Methylation of SCN8A in colon adenocarcinoma [ 4 ]

Location

TSS1500 (cg04981611)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:3.88E+00 Statistic Test p-value:2.48E-04; Z-score:1.28E+01

Methylation in Case

2.96E-01 (Median) Methylation in Control 7.64E-02 (Median)

Studied Phenotype

Colon cancer[ ICD-11:2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon3

Methylation of SCN8A in colon adenocarcinoma [ 4 ]

Location

1stExon (cg10319663)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.19E+00 Statistic Test p-value:1.87E-03; Z-score:-3.70E+00

Methylation in Case

6.45E-01 (Median) Methylation in Control 7.65E-01 (Median)

Studied Phenotype

Colon cancer[ ICD-11:2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon4

Methylation of SCN8A in colon adenocarcinoma [ 4 ]

Location

Body (cg17989736)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.18E+00 Statistic Test p-value:3.64E-05; Z-score:-4.34E+00

Methylation in Case

6.81E-01 (Median) Methylation in Control 8.05E-01 (Median)

Studied Phenotype

Colon cancer[ ICD-11:2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon5

Methylation of SCN8A in colon adenocarcinoma [ 4 ]

Location

Body (cg18645002)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.14E+00 Statistic Test p-value:8.62E-04; Z-score:-1.88E+00

Methylation in Case

6.47E-01 (Median) Methylation in Control 7.39E-01 (Median)

Studied Phenotype

Colon cancer[ ICD-11:2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon6

Methylation of SCN8A in colon adenocarcinoma [ 4 ]

Location

Body (cg20818262)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.02E+00 Statistic Test p-value:1.59E-03; Z-score:-9.25E-01

Methylation in Case

8.30E-01 (Median) Methylation in Control 8.49E-01 (Median)

Studied Phenotype

Colon cancer[ ICD-11:2B90]

Experimental Material

Patient tissue samples

  Colorectal cancer

         22 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon1

Methylation of SCN8A in colorectal cancer [ 5 ]

Location

5'UTR (cg16918684)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.04E+00 Statistic Test p-value:5.13E-06; Z-score:-1.27E+00

Methylation in Case

8.75E-01 (Median) Methylation in Control 9.06E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon2

Methylation of SCN8A in colorectal cancer [ 5 ]

Location

5'UTR (cg23909029)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.00E+00 Statistic Test p-value:1.09E-04; Z-score:-1.34E-04

Methylation in Case

1.34E-01 (Median) Methylation in Control 1.34E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon3

Methylation of SCN8A in colorectal cancer [ 5 ]

Location

5'UTR (cg10170677)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.23E+00 Statistic Test p-value:3.52E-04; Z-score:9.85E-01

Methylation in Case

9.68E-02 (Median) Methylation in Control 7.84E-02 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon4

Methylation of SCN8A in colorectal cancer [ 5 ]

Location

5'UTR (cg21834754)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.01E+00 Statistic Test p-value:1.48E-03; Z-score:-7.73E-01

Methylation in Case

9.15E-01 (Median) Methylation in Control 9.26E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon5

Methylation of SCN8A in colorectal cancer [ 5 ]

Location

TSS1500 (cg27575217)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.01E+00 Statistic Test p-value:2.28E-02; Z-score:-2.16E-02

Methylation in Case

6.83E-02 (Median) Methylation in Control 6.87E-02 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon6

Methylation of SCN8A in colorectal cancer [ 5 ]

Location

TSS1500 (cg20942339)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.06E+00 Statistic Test p-value:2.79E-02; Z-score:-1.58E-01

Methylation in Case

2.76E-02 (Median) Methylation in Control 2.94E-02 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon7

Methylation of SCN8A in colorectal cancer [ 5 ]

Location

TSS200 (cg22199410)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:2.30E+00 Statistic Test p-value:6.57E-08; Z-score:5.28E+00

Methylation in Case

1.05E-01 (Median) Methylation in Control 4.56E-02 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon8

Methylation of SCN8A in colorectal cancer [ 5 ]

Location

TSS200 (cg01289656)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.26E+00 Statistic Test p-value:9.71E-04; Z-score:1.05E+00

Methylation in Case

2.74E-02 (Median) Methylation in Control 2.17E-02 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon9

Methylation of SCN8A in colorectal cancer [ 5 ]

Location

TSS200 (cg22349780)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.34E+00 Statistic Test p-value:1.52E-03; Z-score:1.26E+00

Methylation in Case

2.73E-02 (Median) Methylation in Control 2.04E-02 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon10

Methylation of SCN8A in colorectal cancer [ 5 ]

Location

TSS200 (cg24534098)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.17E+00 Statistic Test p-value:2.88E-03; Z-score:1.02E+00

Methylation in Case

2.99E-02 (Median) Methylation in Control 2.54E-02 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon11

Methylation of SCN8A in colorectal cancer [ 5 ]

Location

TSS200 (cg05861454)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.09E+00 Statistic Test p-value:6.32E-03; Z-score:1.95E-01

Methylation in Case

1.64E-02 (Median) Methylation in Control 1.50E-02 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon12

Methylation of SCN8A in colorectal cancer [ 5 ]

Location

Body (cg15029631)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.10E+00 Statistic Test p-value:1.65E-07; Z-score:-2.34E+00

Methylation in Case

8.01E-01 (Median) Methylation in Control 8.83E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon13

Methylation of SCN8A in colorectal cancer [ 5 ]

Location

Body (cg15618336)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.05E+00 Statistic Test p-value:8.62E-06; Z-score:-1.36E+00

Methylation in Case

8.55E-01 (Median) Methylation in Control 8.98E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon14

Methylation of SCN8A in colorectal cancer [ 5 ]

Location

Body (cg07884867)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.04E+00 Statistic Test p-value:3.98E-05; Z-score:-1.23E+00

Methylation in Case

8.62E-01 (Median) Methylation in Control 8.99E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon15

Methylation of SCN8A in colorectal cancer [ 5 ]

Location

Body (cg19760651)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.04E+00 Statistic Test p-value:2.79E-04; Z-score:-8.50E-01

Methylation in Case

8.14E-01 (Median) Methylation in Control 8.43E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon16

Methylation of SCN8A in colorectal cancer [ 5 ]

Location

Body (cg19156231)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.17E+00 Statistic Test p-value:1.88E-03; Z-score:3.89E-01

Methylation in Case

4.71E-01 (Median) Methylation in Control 4.04E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon17

Methylation of SCN8A in colorectal cancer [ 5 ]

Location

Body (cg21865762)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.03E+00 Statistic Test p-value:8.90E-03; Z-score:-5.86E-01

Methylation in Case

8.40E-01 (Median) Methylation in Control 8.62E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon18

Methylation of SCN8A in colorectal cancer [ 5 ]

Location

Body (cg13843573)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.01E+00 Statistic Test p-value:1.22E-02; Z-score:-4.65E-01

Methylation in Case

8.78E-01 (Median) Methylation in Control 8.90E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon19

Methylation of SCN8A in colorectal cancer [ 5 ]

Location

Body (cg19055098)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.12E+00 Statistic Test p-value:1.80E-02; Z-score:1.35E+00

Methylation in Case

8.29E-01 (Median) Methylation in Control 7.42E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon20

Methylation of SCN8A in colorectal cancer [ 5 ]

Location

Body (cg08253824)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.02E+00 Statistic Test p-value:3.80E-02; Z-score:7.94E-01

Methylation in Case

9.38E-01 (Median) Methylation in Control 9.24E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon21

Methylation of SCN8A in colorectal cancer [ 5 ]

Location

3'UTR (cg20059682)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.02E+00 Statistic Test p-value:6.48E-05; Z-score:-1.36E+00

Methylation in Case

8.88E-01 (Median) Methylation in Control 9.09E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Hepatocellular carcinoma

         13 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon1

Methylation of SCN8A in hepatocellular carcinoma [ 6 ]

Location

5'UTR (cg09300114)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.33E+00 Statistic Test p-value:5.52E-11; Z-score:1.43E+00

Methylation in Case

6.49E-01 (Median) Methylation in Control 4.87E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon2

Methylation of SCN8A in hepatocellular carcinoma [ 6 ]

Location

5'UTR (cg16918684)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.31E+00 Statistic Test p-value:1.66E-06; Z-score:-1.31E+00

Methylation in Case

4.16E-01 (Median) Methylation in Control 5.44E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon3

Methylation of SCN8A in hepatocellular carcinoma [ 6 ]

Location

5'UTR (cg08140412)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.24E+00 Statistic Test p-value:2.52E-03; Z-score:-9.48E-01

Methylation in Case

3.06E-01 (Median) Methylation in Control 3.78E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon4

Methylation of SCN8A in hepatocellular carcinoma [ 6 ]

Location

TSS1500 (cg12907876)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.57E+00 Statistic Test p-value:1.97E-20; Z-score:-3.49E+00

Methylation in Case

3.78E-01 (Median) Methylation in Control 5.93E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon5

Methylation of SCN8A in hepatocellular carcinoma [ 6 ]

Location

TSS1500 (cg02540858)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.52E+00 Statistic Test p-value:6.30E-14; Z-score:-3.18E+00

Methylation in Case

4.03E-01 (Median) Methylation in Control 6.13E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon6

Methylation of SCN8A in hepatocellular carcinoma [ 6 ]

Location

TSS1500 (cg14482308)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:2.47E+00 Statistic Test p-value:9.73E-14; Z-score:3.04E+00

Methylation in Case

4.61E-01 (Median) Methylation in Control 1.86E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon7

Methylation of SCN8A in hepatocellular carcinoma [ 6 ]

Location

Body (cg03366891)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.61E+00 Statistic Test p-value:8.60E-23; Z-score:-3.88E+00

Methylation in Case

4.11E-01 (Median) Methylation in Control 6.62E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon8

Methylation of SCN8A in hepatocellular carcinoma [ 6 ]

Location

Body (cg06943853)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.40E+00 Statistic Test p-value:3.58E-12; Z-score:-1.99E+00

Methylation in Case

5.59E-01 (Median) Methylation in Control 7.84E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon9

Methylation of SCN8A in hepatocellular carcinoma [ 6 ]

Location

Body (cg06145736)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.39E+00 Statistic Test p-value:3.16E-10; Z-score:-2.74E+00

Methylation in Case

3.97E-01 (Median) Methylation in Control 5.52E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon10

Methylation of SCN8A in hepatocellular carcinoma [ 6 ]

Location

Body (cg27304952)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.34E+00 Statistic Test p-value:1.84E-09; Z-score:-1.52E+00

Methylation in Case

4.65E-01 (Median) Methylation in Control 6.22E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon11

Methylation of SCN8A in hepatocellular carcinoma [ 6 ]

Location

Body (cg19055098)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.01E+00 Statistic Test p-value:4.25E-04; Z-score:-4.14E-01

Methylation in Case

8.41E-01 (Median) Methylation in Control 8.50E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon12

Methylation of SCN8A in hepatocellular carcinoma [ 6 ]

Location

3'UTR (cg14592673)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.50E+00 Statistic Test p-value:4.59E-15; Z-score:-2.31E+00

Methylation in Case

3.39E-01 (Median) Methylation in Control 5.09E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon13

Methylation of SCN8A in hepatocellular carcinoma [ 6 ]

Location

3'UTR (cg07695089)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.30E+00 Statistic Test p-value:4.34E-12; Z-score:-9.19E+00

Methylation in Case

7.20E-01 (Median) Methylation in Control 9.34E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Lung adenocarcinoma

         10 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon1

Methylation of SCN8A in lung adenocarcinoma [ 7 ]

Location

5'UTR (cg21834754)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.05E+00 Statistic Test p-value:1.56E-03; Z-score:-2.38E+00

Methylation in Case

8.15E-01 (Median) Methylation in Control 8.57E-01 (Median)

Studied Phenotype

Lung adenocarcinoma[ ICD-11:2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon2

Methylation of SCN8A in lung adenocarcinoma [ 7 ]

Location

5'UTR (cg08140412)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.23E+00 Statistic Test p-value:2.19E-03; Z-score:-2.13E+00

Methylation in Case

3.97E-01 (Median) Methylation in Control 4.90E-01 (Median)

Studied Phenotype

Lung adenocarcinoma[ ICD-11:2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon3

Methylation of SCN8A in lung adenocarcinoma [ 7 ]

Location

TSS1500 (cg18426142)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.19E+00 Statistic Test p-value:2.53E-02; Z-score:-1.25E+00

Methylation in Case

2.97E-01 (Median) Methylation in Control 3.54E-01 (Median)

Studied Phenotype

Lung adenocarcinoma[ ICD-11:2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon4

Methylation of SCN8A in lung adenocarcinoma [ 7 ]

Location

Body (cg15618336)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.17E+00 Statistic Test p-value:9.47E-04; Z-score:-9.48E+00

Methylation in Case

7.65E-01 (Median) Methylation in Control 8.94E-01 (Median)

Studied Phenotype

Lung adenocarcinoma[ ICD-11:2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon5

Methylation of SCN8A in lung adenocarcinoma [ 7 ]

Location

Body (cg15029631)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.06E+00 Statistic Test p-value:1.06E-02; Z-score:-2.17E+00

Methylation in Case

8.16E-01 (Median) Methylation in Control 8.68E-01 (Median)

Studied Phenotype

Lung adenocarcinoma[ ICD-11:2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon6

Methylation of SCN8A in lung adenocarcinoma [ 7 ]

Location

Body (cg21865762)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.06E+00 Statistic Test p-value:1.57E-02; Z-score:-1.47E+00

Methylation in Case

7.38E-01 (Median) Methylation in Control 7.83E-01 (Median)

Studied Phenotype

Lung adenocarcinoma[ ICD-11:2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon7

Methylation of SCN8A in lung adenocarcinoma [ 7 ]

Location

Body (cg19055098)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.03E+00 Statistic Test p-value:2.59E-02; Z-score:7.90E-01

Methylation in Case

8.18E-01 (Median) Methylation in Control 7.92E-01 (Median)

Studied Phenotype

Lung adenocarcinoma[ ICD-11:2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon8

Methylation of SCN8A in lung adenocarcinoma [ 7 ]

Location

Body (cg24946795)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.33E+00 Statistic Test p-value:3.45E-02; Z-score:1.10E+00

Methylation in Case

3.63E-01 (Median) Methylation in Control 2.72E-01 (Median)

Studied Phenotype

Lung adenocarcinoma[ ICD-11:2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon9

Methylation of SCN8A in lung adenocarcinoma [ 7 ]

Location

Body (cg06014251)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.02E+00 Statistic Test p-value:4.19E-02; Z-score:-1.28E+00

Methylation in Case

8.96E-01 (Median) Methylation in Control 9.13E-01 (Median)

Studied Phenotype

Lung adenocarcinoma[ ICD-11:2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon10

Methylation of SCN8A in lung adenocarcinoma [ 7 ]

Location

3'UTR (cg20059682)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.04E+00 Statistic Test p-value:1.52E-02; Z-score:-2.24E+00

Methylation in Case

8.24E-01 (Median) Methylation in Control 8.58E-01 (Median)

Studied Phenotype

Lung adenocarcinoma[ ICD-11:2C25.0]

Experimental Material

Patient tissue samples

  Pancretic ductal adenocarcinoma

         20 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon1

Methylation of SCN8A in pancretic ductal adenocarcinoma [ 8 ]

Location

5'UTR (cg24296484)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.34E+00 Statistic Test p-value:4.43E-06; Z-score:-1.31E+00

Methylation in Case

1.49E-01 (Median) Methylation in Control 2.00E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma[ ICD-11:2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon2

Methylation of SCN8A in pancretic ductal adenocarcinoma [ 8 ]

Location

5'UTR (cg22855020)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.64E+00 Statistic Test p-value:6.42E-06; Z-score:1.33E+00

Methylation in Case

5.44E-01 (Median) Methylation in Control 3.32E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma[ ICD-11:2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon3

Methylation of SCN8A in pancretic ductal adenocarcinoma [ 8 ]

Location

TSS1500 (cg07973479)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.20E+00 Statistic Test p-value:4.84E-04; Z-score:8.89E-01

Methylation in Case

7.15E-01 (Median) Methylation in Control 5.96E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma[ ICD-11:2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon4

Methylation of SCN8A in pancretic ductal adenocarcinoma [ 8 ]

Location

TSS1500 (cg17363443)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.20E+00 Statistic Test p-value:2.96E-03; Z-score:-5.46E-01

Methylation in Case

1.01E-01 (Median) Methylation in Control 1.21E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma[ ICD-11:2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon5

Methylation of SCN8A in pancretic ductal adenocarcinoma [ 8 ]

Location

TSS1500 (cg20313963)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.51E+00 Statistic Test p-value:8.67E-03; Z-score:-8.89E-01

Methylation in Case

2.72E-01 (Median) Methylation in Control 4.12E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma[ ICD-11:2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon6

Methylation of SCN8A in pancretic ductal adenocarcinoma [ 8 ]

Location

TSS200 (cg20177385)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.09E+00 Statistic Test p-value:1.01E-04; Z-score:-8.53E-01

Methylation in Case

6.00E-01 (Median) Methylation in Control 6.53E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma[ ICD-11:2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon7

Methylation of SCN8A in pancretic ductal adenocarcinoma [ 8 ]

Location

1stExon (cg26233253)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.16E+00 Statistic Test p-value:7.26E-05; Z-score:-1.28E+00

Methylation in Case

5.79E-01 (Median) Methylation in Control 6.71E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma[ ICD-11:2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon8

Methylation of SCN8A in pancretic ductal adenocarcinoma [ 8 ]

Location

1stExon (cg21286921)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.02E+00 Statistic Test p-value:1.91E-04; Z-score:3.07E-01

Methylation in Case

4.61E-01 (Median) Methylation in Control 4.53E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma[ ICD-11:2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon9

Methylation of SCN8A in pancretic ductal adenocarcinoma [ 8 ]

Location

1stExon (cg06654103)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.02E+00 Statistic Test p-value:5.05E-03; Z-score:5.81E-01

Methylation in Case

8.78E-01 (Median) Methylation in Control 8.60E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma[ ICD-11:2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon10

Methylation of SCN8A in pancretic ductal adenocarcinoma [ 8 ]

Location

Body (cg18268220)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.30E+00 Statistic Test p-value:1.25E-08; Z-score:-1.53E+00

Methylation in Case

2.04E-01 (Median) Methylation in Control 2.65E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma[ ICD-11:2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon11

Methylation of SCN8A in pancretic ductal adenocarcinoma [ 8 ]

Location

Body (cg04083076)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.14E+00 Statistic Test p-value:7.46E-06; Z-score:1.48E+00

Methylation in Case

7.39E-01 (Median) Methylation in Control 6.46E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma[ ICD-11:2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon12

Methylation of SCN8A in pancretic ductal adenocarcinoma [ 8 ]

Location

Body (cg09183468)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.04E+00 Statistic Test p-value:6.86E-05; Z-score:8.33E-01

Methylation in Case

7.74E-01 (Median) Methylation in Control 7.42E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma[ ICD-11:2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon13

Methylation of SCN8A in pancretic ductal adenocarcinoma [ 8 ]

Location

Body (cg03042281)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.04E+00 Statistic Test p-value:5.58E-04; Z-score:3.09E-01

Methylation in Case

8.74E-01 (Median) Methylation in Control 8.41E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma[ ICD-11:2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon14

Methylation of SCN8A in pancretic ductal adenocarcinoma [ 8 ]

Location

Body (cg26197117)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.11E+00 Statistic Test p-value:9.76E-04; Z-score:3.97E-01

Methylation in Case

2.24E-01 (Median) Methylation in Control 2.02E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma[ ICD-11:2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon15

Methylation of SCN8A in pancretic ductal adenocarcinoma [ 8 ]

Location

Body (cg25225073)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.06E+00 Statistic Test p-value:1.03E-03; Z-score:1.92E-01

Methylation in Case

9.45E-02 (Median) Methylation in Control 8.91E-02 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma[ ICD-11:2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon16

Methylation of SCN8A in pancretic ductal adenocarcinoma [ 8 ]

Location

Body (cg05659242)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.52E+00 Statistic Test p-value:1.49E-02; Z-score:-6.78E-01

Methylation in Case

9.72E-02 (Median) Methylation in Control 1.48E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma[ ICD-11:2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon17

Methylation of SCN8A in pancretic ductal adenocarcinoma [ 8 ]

Location

Body (cg05478779)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.04E+00 Statistic Test p-value:2.40E-02; Z-score:-1.66E-01

Methylation in Case

1.82E-01 (Median) Methylation in Control 1.90E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma[ ICD-11:2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon18

Methylation of SCN8A in pancretic ductal adenocarcinoma [ 8 ]

Location

3'UTR (cg07046101)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.15E+00 Statistic Test p-value:8.45E-07; Z-score:-1.02E+00

Methylation in Case

4.45E-01 (Median) Methylation in Control 5.10E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma[ ICD-11:2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon19

Methylation of SCN8A in pancretic ductal adenocarcinoma [ 8 ]

Location

3'UTR (cg14564815)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.13E+00 Statistic Test p-value:8.90E-05; Z-score:-1.08E+00

Methylation in Case

2.83E-01 (Median) Methylation in Control 3.21E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma[ ICD-11:2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon20

Methylation of SCN8A in pancretic ductal adenocarcinoma [ 8 ]

Location

3'UTR (cg04227743)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.04E+00 Statistic Test p-value:4.64E-02; Z-score:-5.85E-01

Methylation in Case

8.55E-01 (Median) Methylation in Control 8.89E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma[ ICD-11:2C10.0]

Experimental Material

Patient tissue samples

  Panic disorder

           5 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon1

Methylation of SCN8A in panic disorder [ 9 ]

Location

5'UTR (cg21834754)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.02E+00 Statistic Test p-value:8.12E-03; Z-score:2.08E-01

Methylation in Case

2.87E+00 (Median) Methylation in Control 2.80E+00 (Median)

Studied Phenotype

Panic disorder[ ICD-11:6B01]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon2

Methylation of SCN8A in panic disorder [ 9 ]

Location

TSS1500 (cg27575217)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:9.77E-01 Statistic Test p-value:3.60E-02; Z-score:3.22E-01

Methylation in Case

-5.20E+00 (Median) Methylation in Control -5.32E+00 (Median)

Studied Phenotype

Panic disorder[ ICD-11:6B01]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon3

Methylation of SCN8A in panic disorder [ 9 ]

Location

Body (cg07884867)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.22E+00 Statistic Test p-value:2.18E-03; Z-score:-5.35E-01

Methylation in Case

9.39E-01 (Median) Methylation in Control 1.15E+00 (Median)

Studied Phenotype

Panic disorder[ ICD-11:6B01]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon4

Methylation of SCN8A in panic disorder [ 9 ]

Location

Body (cg19156231)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:9.31E-01 Statistic Test p-value:2.26E-03; Z-score:3.86E-01

Methylation in Case

-4.76E+00 (Median) Methylation in Control -5.12E+00 (Median)

Studied Phenotype

Panic disorder[ ICD-11:6B01]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon5

Methylation of SCN8A in panic disorder [ 9 ]

Location

Body (cg15029631)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:2.43E-01 Statistic Test p-value:4.45E-03; Z-score:-4.39E-01

Methylation in Case

-1.98E-01 (Median) Methylation in Control 4.81E-02 (Median)

Studied Phenotype

Panic disorder[ ICD-11:6B01]

Experimental Material

Patient tissue samples

  Papillary thyroid cancer

         11 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon1

Methylation of SCN8A in papillary thyroid cancer [ 10 ]

Location

5'UTR (cg08140412)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.22E+00 Statistic Test p-value:1.35E-07; Z-score:-1.63E+00

Methylation in Case

4.68E-01 (Median) Methylation in Control 5.72E-01 (Median)

Studied Phenotype

Papillary thyroid cancer[ ICD-11:2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon2

Methylation of SCN8A in papillary thyroid cancer [ 10 ]

Location

5'UTR (cg16918684)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.01E+00 Statistic Test p-value:4.97E-03; Z-score:5.64E-01

Methylation in Case

8.92E-01 (Median) Methylation in Control 8.80E-01 (Median)

Studied Phenotype

Papillary thyroid cancer[ ICD-11:2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon3

Methylation of SCN8A in papillary thyroid cancer [ 10 ]

Location

5'UTR (cg21834754)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.01E+00 Statistic Test p-value:2.03E-02; Z-score:-6.04E-01

Methylation in Case

9.17E-01 (Median) Methylation in Control 9.27E-01 (Median)

Studied Phenotype

Papillary thyroid cancer[ ICD-11:2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon4

Methylation of SCN8A in papillary thyroid cancer [ 10 ]

Location

TSS1500 (cg27575217)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.15E+00 Statistic Test p-value:1.40E-03; Z-score:-6.76E-01

Methylation in Case

3.86E-02 (Median) Methylation in Control 4.45E-02 (Median)

Studied Phenotype

Papillary thyroid cancer[ ICD-11:2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon5

Methylation of SCN8A in papillary thyroid cancer [ 10 ]

Location

TSS1500 (cg18426142)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.46E+00 Statistic Test p-value:4.14E-02; Z-score:-1.92E+00

Methylation in Case

1.72E-01 (Median) Methylation in Control 2.52E-01 (Median)

Studied Phenotype

Papillary thyroid cancer[ ICD-11:2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon6

Methylation of SCN8A in papillary thyroid cancer [ 10 ]

Location

Body (cg15618336)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.13E+00 Statistic Test p-value:1.10E-16; Z-score:-4.19E+00

Methylation in Case

8.24E-01 (Median) Methylation in Control 9.28E-01 (Median)

Studied Phenotype

Papillary thyroid cancer[ ICD-11:2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon7

Methylation of SCN8A in papillary thyroid cancer [ 10 ]

Location

Body (cg19055098)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.27E+00 Statistic Test p-value:1.72E-06; Z-score:-1.33E+00

Methylation in Case

4.12E-01 (Median) Methylation in Control 5.25E-01 (Median)

Studied Phenotype

Papillary thyroid cancer[ ICD-11:2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon8

Methylation of SCN8A in papillary thyroid cancer [ 10 ]

Location

Body (cg07884867)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.04E+00 Statistic Test p-value:2.22E-06; Z-score:-1.07E+00

Methylation in Case

8.21E-01 (Median) Methylation in Control 8.53E-01 (Median)

Studied Phenotype

Papillary thyroid cancer[ ICD-11:2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon9

Methylation of SCN8A in papillary thyroid cancer [ 10 ]

Location

Body (cg06014251)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.01E+00 Statistic Test p-value:2.78E-03; Z-score:-9.39E-01

Methylation in Case

9.49E-01 (Median) Methylation in Control 9.57E-01 (Median)

Studied Phenotype

Papillary thyroid cancer[ ICD-11:2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon10

Methylation of SCN8A in papillary thyroid cancer [ 10 ]

Location

Body (cg13576200)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.02E+00 Statistic Test p-value:1.04E-02; Z-score:-5.87E-01

Methylation in Case

8.71E-01 (Median) Methylation in Control 8.86E-01 (Median)

Studied Phenotype

Papillary thyroid cancer[ ICD-11:2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon11

Methylation of SCN8A in papillary thyroid cancer [ 10 ]

Location

Body (cg06100533)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.01E+00 Statistic Test p-value:2.55E-02; Z-score:-3.27E-01

Methylation in Case

9.33E-01 (Median) Methylation in Control 9.38E-01 (Median)

Studied Phenotype

Papillary thyroid cancer[ ICD-11:2D10.1]

Experimental Material

Patient tissue samples

  Prostate cancer

           3 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon1

Methylation of SCN8A in prostate cancer [ 11 ]

Location

5'UTR (cg23420841)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.13E+00 Statistic Test p-value:2.01E-02; Z-score:2.43E+00

Methylation in Case

9.30E-01 (Median) Methylation in Control 8.22E-01 (Median)

Studied Phenotype

Prostate cancer[ ICD-11:2C82]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon2

Methylation of SCN8A in prostate cancer [ 11 ]

Location

Body (cg16463165)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.16E+00 Statistic Test p-value:1.23E-02; Z-score:2.63E+00

Methylation in Case

8.56E-01 (Median) Methylation in Control 7.37E-01 (Median)

Studied Phenotype

Prostate cancer[ ICD-11:2C82]

Experimental Material

Patient tissue samples

  Celiac disease

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon1

Methylation of SCN8A in celiac disease [ 12 ]

Location

Body (cg15029631)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.10E+00 Statistic Test p-value:2.53E-02; Z-score:-1.18E+00

Methylation in Case

7.93E-01 (Median) Methylation in Control 8.69E-01 (Median)

Studied Phenotype

Celiac disease[ ICD-11:DA95]

Experimental Material

Patient tissue samples
References
1 DNA Methylation Dynamics in Urological Tumors.
2 Genome-wide Scan for Methylation Profiles in Breast Cancer
3 A CpG-methylation-based assay to predict survival in clear cell renal cell carcinoma. Nat Commun. 2015 Oct 30;6:8699.
4 Genome-scale analysis of DNA methylation in colorectal cancer using Infinium HumanMethylation450 BeadChips. Epigenetics. 2013 Sep;8(9):921-34.
5 Differences in DNA methylation signatures reveal multiple pathways of progression from adenoma to colorectal cancer. Gastroenterology. 2014 Aug;147(2):418-29.e8.
6 Exploring genome-wide DNA methylation profiles altered in hepatocellular carcinoma using Infinium HumanMethylation 450 BeadChips. Epigenetics. 2013 Jan;8(1):34-43.
7 DNA methylation analysis of lung adenocarcinoma and adjacent non-tumor tissues
8 Genome-wide DNA methylation patterns in pancreatic ductal adenocarcinoma reveal epigenetic deregulation of SLIT-ROBO, ITGA2 and MET signaling. Int J Cancer. 2014 Sep 1;135(5):1110-8.
9 DNA Methylation signatures in panic disorder. Transl Psychiatry. 2017 Dec 18;7(12):1287.
10 Prognostic Classifier Based on Genome-Wide DNA Methylation Profiling in Well-Differentiated Thyroid Tumors. J Clin Endocrinol Metab. 2017 Nov 1;102(11):4089-4099.
11 Reducing the risk of false discovery enabling identification of biologically significant genome-wide methylation status using the HumanMethylation450 array. BMC Genomics. 2014 Jan 22;15:51.
12 The methylome of the celiac intestinal epithelium harbours genotype-independent alterations in the HLA region. Mol Ther Oncolytics. 2019 Feb 5;12:235-245.

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