General Information of Drug Transporter (DT)
DT ID DTD0041 Transporter Info
Gene Name ABCA3
Transporter Name ATP-binding cassette sub-family A member 3
Gene ID
21
UniProt ID
Q99758
Epigenetic Regulations of This DT (EGR)

Methylation

  Atypical teratoid rhabdoid tumor

         43 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon1

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

5'UTR (cg02543796)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.15E+00 Statistic Test p-value:1.26E-08; Z-score:1.37E+00

Methylation in Case

8.93E-01 (Median) Methylation in Control 7.80E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon2

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

5'UTR (cg04783228)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.15E+00 Statistic Test p-value:3.78E-08; Z-score:-1.83E+00

Methylation in Case

7.12E-01 (Median) Methylation in Control 8.16E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon3

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

5'UTR (cg06250288)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.30E+00 Statistic Test p-value:5.91E-08; Z-score:1.40E+00

Methylation in Case

9.12E-01 (Median) Methylation in Control 7.00E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon4

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

5'UTR (cg08644341)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.15E+00 Statistic Test p-value:1.47E-07; Z-score:1.35E+00

Methylation in Case

8.91E-01 (Median) Methylation in Control 7.74E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon5

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

5'UTR (cg08900781)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.40E+00 Statistic Test p-value:1.56E-07; Z-score:-1.38E+00

Methylation in Case

3.56E-01 (Median) Methylation in Control 4.98E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon6

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

5'UTR (cg09722408)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.09E+00 Statistic Test p-value:1.90E-07; Z-score:-1.09E+00

Methylation in Case

6.61E-01 (Median) Methylation in Control 7.22E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon7

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg00039478)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.08E+00 Statistic Test p-value:1.50E-05; Z-score:8.52E-01

Methylation in Case

8.19E-01 (Median) Methylation in Control 7.56E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon8

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg00644103)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.07E+00 Statistic Test p-value:3.13E-05; Z-score:8.11E-01

Methylation in Case

8.74E-01 (Median) Methylation in Control 8.14E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon9

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg00718541)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.34E+00 Statistic Test p-value:3.50E-05; Z-score:1.32E+00

Methylation in Case

8.33E-01 (Median) Methylation in Control 6.23E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon10

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg01278797)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.10E+00 Statistic Test p-value:5.79E-05; Z-score:5.52E-01

Methylation in Case

9.17E-01 (Median) Methylation in Control 8.32E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon11

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg01491428)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.02E+00 Statistic Test p-value:7.00E-05; Z-score:-7.29E-01

Methylation in Case

8.99E-01 (Median) Methylation in Control 9.16E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon12

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg01550915)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.39E+00 Statistic Test p-value:7.08E-05; Z-score:-1.23E+00

Methylation in Case

4.30E-01 (Median) Methylation in Control 5.98E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon13

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg02124920)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.10E+00 Statistic Test p-value:1.19E-04; Z-score:5.93E-01

Methylation in Case

8.67E-01 (Median) Methylation in Control 7.88E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon14

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg02257312)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.20E+00 Statistic Test p-value:1.38E-04; Z-score:-7.90E-01

Methylation in Case

4.76E-01 (Median) Methylation in Control 5.71E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon15

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg02715407)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.61E+00 Statistic Test p-value:2.23E-04; Z-score:-1.27E+00

Methylation in Case

2.13E-01 (Median) Methylation in Control 3.42E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon16

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg04058100)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.33E+00 Statistic Test p-value:5.45E-04; Z-score:-7.47E-01

Methylation in Case

3.09E-01 (Median) Methylation in Control 4.12E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon17

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg04149930)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.08E+00 Statistic Test p-value:5.72E-04; Z-score:-7.28E-01

Methylation in Case

5.32E-01 (Median) Methylation in Control 5.74E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon18

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg05093254)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.22E+00 Statistic Test p-value:1.23E-03; Z-score:8.82E-01

Methylation in Case

5.90E-01 (Median) Methylation in Control 4.85E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon19

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg05147509)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.74E+00 Statistic Test p-value:1.30E-03; Z-score:-9.63E-01

Methylation in Case

1.37E-01 (Median) Methylation in Control 2.39E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon20

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg05218653)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.09E+00 Statistic Test p-value:1.33E-03; Z-score:-8.69E-01

Methylation in Case

7.05E-01 (Median) Methylation in Control 7.69E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon21

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg05654361)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.25E+00 Statistic Test p-value:1.59E-03; Z-score:1.09E+00

Methylation in Case

6.59E-01 (Median) Methylation in Control 5.28E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon22

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg05814755)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.28E+00 Statistic Test p-value:1.67E-03; Z-score:-8.79E-01

Methylation in Case

4.71E-01 (Median) Methylation in Control 6.02E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon23

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg05824333)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.03E+00 Statistic Test p-value:1.69E-03; Z-score:-4.97E-01

Methylation in Case

8.01E-01 (Median) Methylation in Control 8.27E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon24

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg06780216)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.03E+00 Statistic Test p-value:2.93E-03; Z-score:5.24E-01

Methylation in Case

8.85E-01 (Median) Methylation in Control 8.62E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon25

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg06933862)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.27E+00 Statistic Test p-value:3.09E-03; Z-score:-6.91E-01

Methylation in Case

8.30E-02 (Median) Methylation in Control 1.06E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon26

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg07301574)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.07E+00 Statistic Test p-value:3.75E-03; Z-score:5.79E-01

Methylation in Case

8.65E-01 (Median) Methylation in Control 8.09E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon27

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg07701514)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.20E+00 Statistic Test p-value:4.81E-03; Z-score:4.13E-01

Methylation in Case

7.95E-02 (Median) Methylation in Control 6.63E-02 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon28

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg07753939)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.12E+00 Statistic Test p-value:4.96E-03; Z-score:6.08E-01

Methylation in Case

7.95E-01 (Median) Methylation in Control 7.12E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon29

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg08131081)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.06E+00 Statistic Test p-value:5.36E-03; Z-score:3.09E-01

Methylation in Case

1.03E-01 (Median) Methylation in Control 9.66E-02 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon30

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg08322747)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.06E+00 Statistic Test p-value:5.76E-03; Z-score:-5.07E-01

Methylation in Case

8.17E-01 (Median) Methylation in Control 8.64E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon31

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg08449748)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.12E+00 Statistic Test p-value:6.57E-03; Z-score:6.68E-01

Methylation in Case

6.02E-01 (Median) Methylation in Control 5.36E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon32

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg08490220)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.02E+00 Statistic Test p-value:7.05E-03; Z-score:3.22E-01

Methylation in Case

8.64E-01 (Median) Methylation in Control 8.46E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon33

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg09263316)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.01E+00 Statistic Test p-value:9.73E-03; Z-score:-4.17E-01

Methylation in Case

8.10E-01 (Median) Methylation in Control 8.22E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon34

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg09481056)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.04E+00 Statistic Test p-value:1.07E-02; Z-score:-6.16E-01

Methylation in Case

8.12E-01 (Median) Methylation in Control 8.45E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon35

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg09632163)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.04E+00 Statistic Test p-value:1.13E-02; Z-score:6.28E-01

Methylation in Case

8.69E-01 (Median) Methylation in Control 8.37E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon36

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg09681286)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.08E+00 Statistic Test p-value:1.18E-02; Z-score:6.92E-01

Methylation in Case

7.87E-01 (Median) Methylation in Control 7.31E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon37

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg09945896)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.02E+00 Statistic Test p-value:1.24E-02; Z-score:-4.92E-01

Methylation in Case

8.80E-01 (Median) Methylation in Control 8.94E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon38

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg09954729)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.04E+00 Statistic Test p-value:1.26E-02; Z-score:5.07E-01

Methylation in Case

8.84E-01 (Median) Methylation in Control 8.50E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon39

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg10125193)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.11E+00 Statistic Test p-value:1.36E-02; Z-score:8.28E-01

Methylation in Case

8.90E-01 (Median) Methylation in Control 8.01E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon40

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg10275969)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.01E+00 Statistic Test p-value:1.43E-02; Z-score:-4.52E-01

Methylation in Case

8.96E-01 (Median) Methylation in Control 9.08E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon41

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

3'UTR (cg06335980)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.21E+00 Statistic Test p-value:1.15E-13; Z-score:-2.15E+00

Methylation in Case

6.80E-01 (Median) Methylation in Control 8.20E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon42

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

3'UTR (cg07737682)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.15E+00 Statistic Test p-value:2.66E-13; Z-score:-2.38E+00

Methylation in Case

7.43E-01 (Median) Methylation in Control 8.56E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon43

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

3'UTR (cg10154010)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.99E+00 Statistic Test p-value:2.51E-12; Z-score:2.13E+00

Methylation in Case

3.97E-01 (Median) Methylation in Control 1.99E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor[ ICD-11:2A00.1Y]

Experimental Material

Patient tissue samples

  Bladder cancer

         32 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon1

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

5'UTR (cg06250288)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.54E+00 Statistic Test p-value:3.48E-13; Z-score:-2.12E+01

Methylation in Case

4.90E-01 (Median) Methylation in Control 7.52E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon2

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

5'UTR (cg08644341)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.40E+00 Statistic Test p-value:1.40E-08; Z-score:-1.81E+01

Methylation in Case

5.75E-01 (Median) Methylation in Control 8.02E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon3

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

5'UTR (cg09722408)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.21E+00 Statistic Test p-value:1.38E-05; Z-score:-6.16E+00

Methylation in Case

7.33E-01 (Median) Methylation in Control 8.86E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon4

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

5'UTR (cg08900781)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.13E+00 Statistic Test p-value:2.68E-05; Z-score:-6.70E+00

Methylation in Case

7.71E-01 (Median) Methylation in Control 8.74E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon5

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

5'UTR (cg02543796)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.06E+00 Statistic Test p-value:1.79E-03; Z-score:-2.53E+00

Methylation in Case

7.57E-01 (Median) Methylation in Control 8.02E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon6

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg01550915)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-2.11E+00 Statistic Test p-value:7.79E-14; Z-score:-3.31E+01

Methylation in Case

3.78E-01 (Median) Methylation in Control 7.98E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon7

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg08490220)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.72E+00 Statistic Test p-value:1.16E-11; Z-score:-1.14E+01

Methylation in Case

3.61E-01 (Median) Methylation in Control 6.22E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon8

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg04149930)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.78E+00 Statistic Test p-value:3.02E-10; Z-score:-1.07E+01

Methylation in Case

4.13E-01 (Median) Methylation in Control 7.38E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon9

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg04058100)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.30E+00 Statistic Test p-value:4.41E-07; Z-score:-1.03E+01

Methylation in Case

6.54E-01 (Median) Methylation in Control 8.53E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon10

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg09954729)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.58E+00 Statistic Test p-value:1.40E-06; Z-score:-7.64E+00

Methylation in Case

5.85E-01 (Median) Methylation in Control 9.26E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon11

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg08131081)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.19E+00 Statistic Test p-value:3.42E-06; Z-score:-2.46E+01

Methylation in Case

7.78E-01 (Median) Methylation in Control 9.22E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon12

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg09263316)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.53E+00 Statistic Test p-value:8.69E-06; Z-score:-1.41E+01

Methylation in Case

5.17E-01 (Median) Methylation in Control 7.94E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon13

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg02257312)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.21E+00 Statistic Test p-value:1.43E-05; Z-score:-1.99E+01

Methylation in Case

7.39E-01 (Median) Methylation in Control 8.91E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon14

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg19754709)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.49E+00 Statistic Test p-value:8.80E-05; Z-score:-4.57E+00

Methylation in Case

4.03E-01 (Median) Methylation in Control 5.98E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon15

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg06780216)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.24E+00 Statistic Test p-value:1.25E-04; Z-score:-6.88E+00

Methylation in Case

6.90E-01 (Median) Methylation in Control 8.58E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon16

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg00644103)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.59E+00 Statistic Test p-value:1.71E-04; Z-score:-4.60E+00

Methylation in Case

3.80E-01 (Median) Methylation in Control 6.07E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon17

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg05147509)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.08E+00 Statistic Test p-value:1.73E-04; Z-score:3.08E+00

Methylation in Case

8.00E-01 (Median) Methylation in Control 7.39E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon18

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg00039478)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.04E+00 Statistic Test p-value:2.56E-04; Z-score:-2.07E+00

Methylation in Case

7.67E-01 (Median) Methylation in Control 7.96E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon19

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg08449748)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.34E+00 Statistic Test p-value:2.97E-04; Z-score:-1.50E+01

Methylation in Case

3.88E-01 (Median) Methylation in Control 5.22E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon20

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg05218653)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.18E+00 Statistic Test p-value:3.48E-04; Z-score:-1.34E+01

Methylation in Case

8.01E-01 (Median) Methylation in Control 9.44E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon21

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg09945896)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.16E+00 Statistic Test p-value:9.52E-04; Z-score:-8.12E+00

Methylation in Case

6.75E-01 (Median) Methylation in Control 7.84E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon22

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg10275969)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.24E+00 Statistic Test p-value:1.63E-03; Z-score:-2.97E+00

Methylation in Case

4.34E-01 (Median) Methylation in Control 5.38E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon23

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg01278797)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.05E+00 Statistic Test p-value:2.29E-03; Z-score:-3.65E+00

Methylation in Case

8.26E-01 (Median) Methylation in Control 8.67E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon24

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg06933862)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.05E+00 Statistic Test p-value:2.83E-03; Z-score:-4.74E+00

Methylation in Case

8.86E-01 (Median) Methylation in Control 9.26E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon25

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg07701514)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.26E+00 Statistic Test p-value:4.08E-03; Z-score:-3.28E+00

Methylation in Case

3.86E-01 (Median) Methylation in Control 4.85E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon26

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg02715407)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.10E+00 Statistic Test p-value:4.77E-03; Z-score:-6.20E+00

Methylation in Case

6.80E-01 (Median) Methylation in Control 7.51E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon27

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg05093254)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.00E+00 Statistic Test p-value:5.57E-03; Z-score:-9.97E-01

Methylation in Case

9.77E-01 (Median) Methylation in Control 9.81E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon28

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg05654361)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.10E+00 Statistic Test p-value:5.82E-03; Z-score:-3.00E+00

Methylation in Case

6.28E-01 (Median) Methylation in Control 6.94E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon29

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg09481056)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.01E+00 Statistic Test p-value:3.17E-02; Z-score:-3.94E-01

Methylation in Case

7.48E-01 (Median) Methylation in Control 7.55E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon30

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

3'UTR (cg06335980)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.45E+00 Statistic Test p-value:9.26E-08; Z-score:-1.42E+01

Methylation in Case

4.90E-01 (Median) Methylation in Control 7.11E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon31

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

3'UTR (cg07737682)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.46E+00 Statistic Test p-value:1.10E-05; Z-score:-5.82E+00

Methylation in Case

4.78E-01 (Median) Methylation in Control 6.98E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon32

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

3'UTR (cg10154010)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.15E+00 Statistic Test p-value:5.78E-03; Z-score:-1.96E+00

Methylation in Case

6.98E-01 (Median) Methylation in Control 8.01E-01 (Median)

Studied Phenotype

Bladder cancer[ ICD-11:2C94]

Experimental Material

Patient tissue samples

  Breast cancer

         20 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon1

Methylation of ABCA3 in breast cancer [ 3 ]

Location

5'UTR (cg08644341)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.10E+00 Statistic Test p-value:1.51E-09; Z-score:1.73E+00

Methylation in Case

7.98E-01 (Median) Methylation in Control 7.24E-01 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon2

Methylation of ABCA3 in breast cancer [ 3 ]

Location

5'UTR (cg08900781)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.03E+00 Statistic Test p-value:4.36E-07; Z-score:-1.28E+00

Methylation in Case

8.43E-01 (Median) Methylation in Control 8.66E-01 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon3

Methylation of ABCA3 in breast cancer [ 3 ]

Location

5'UTR (cg02543796)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.05E+00 Statistic Test p-value:1.48E-02; Z-score:-6.98E-01

Methylation in Case

7.84E-01 (Median) Methylation in Control 8.22E-01 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon4

Methylation of ABCA3 in breast cancer [ 3 ]

Location

Body (cg10275969)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.38E+00 Statistic Test p-value:4.44E-31; Z-score:4.20E+00

Methylation in Case

7.38E-01 (Median) Methylation in Control 5.36E-01 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon5

Methylation of ABCA3 in breast cancer [ 3 ]

Location

Body (cg07701514)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.15E+00 Statistic Test p-value:3.66E-10; Z-score:1.63E+00

Methylation in Case

7.42E-01 (Median) Methylation in Control 6.44E-01 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon6

Methylation of ABCA3 in breast cancer [ 3 ]

Location

Body (cg04149930)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.09E+00 Statistic Test p-value:2.49E-06; Z-score:-1.25E+00

Methylation in Case

7.40E-01 (Median) Methylation in Control 8.09E-01 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon7

Methylation of ABCA3 in breast cancer [ 3 ]

Location

Body (cg05654361)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.05E+00 Statistic Test p-value:7.51E-06; Z-score:1.08E+00

Methylation in Case

7.48E-01 (Median) Methylation in Control 7.14E-01 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon8

Methylation of ABCA3 in breast cancer [ 3 ]

Location

Body (cg10125193)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.05E+00 Statistic Test p-value:1.56E-04; Z-score:-1.11E+00

Methylation in Case

7.90E-01 (Median) Methylation in Control 8.30E-01 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon9

Methylation of ABCA3 in breast cancer [ 3 ]

Location

Body (cg04058100)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.08E+00 Statistic Test p-value:2.39E-04; Z-score:-1.07E+00

Methylation in Case

7.99E-01 (Median) Methylation in Control 8.61E-01 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon10

Methylation of ABCA3 in breast cancer [ 3 ]

Location

Body (cg07753939)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.05E+00 Statistic Test p-value:5.36E-04; Z-score:-8.95E-01

Methylation in Case

9.06E-01 (Median) Methylation in Control 9.55E-01 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon11

Methylation of ABCA3 in breast cancer [ 3 ]

Location

Body (cg09681286)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.02E+00 Statistic Test p-value:1.75E-03; Z-score:2.85E-01

Methylation in Case

8.43E-01 (Median) Methylation in Control 8.29E-01 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon12

Methylation of ABCA3 in breast cancer [ 3 ]

Location

Body (cg09945896)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.08E+00 Statistic Test p-value:2.12E-03; Z-score:4.97E-01

Methylation in Case

8.14E-01 (Median) Methylation in Control 7.53E-01 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon13

Methylation of ABCA3 in breast cancer [ 3 ]

Location

Body (cg00039478)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.03E+00 Statistic Test p-value:7.02E-03; Z-score:-6.84E-01

Methylation in Case

7.42E-01 (Median) Methylation in Control 7.66E-01 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon14

Methylation of ABCA3 in breast cancer [ 3 ]

Location

Body (cg20915212)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.03E+00 Statistic Test p-value:1.12E-02; Z-score:-7.79E-01

Methylation in Case

7.07E-01 (Median) Methylation in Control 7.31E-01 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon15

Methylation of ABCA3 in breast cancer [ 3 ]

Location

Body (cg08449748)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.04E+00 Statistic Test p-value:2.45E-02; Z-score:6.30E-01

Methylation in Case

7.26E-01 (Median) Methylation in Control 6.95E-01 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon16

Methylation of ABCA3 in breast cancer [ 3 ]

Location

Body (cg06780216)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.15E+00 Statistic Test p-value:2.78E-02; Z-score:-5.93E-01

Methylation in Case

8.23E-01 (Median) Methylation in Control 9.43E-01 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon17

Methylation of ABCA3 in breast cancer [ 3 ]

Location

Body (cg02715407)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.02E+00 Statistic Test p-value:3.38E-02; Z-score:-3.37E-01

Methylation in Case

7.69E-01 (Median) Methylation in Control 7.82E-01 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon18

Methylation of ABCA3 in breast cancer [ 3 ]

Location

Body (cg16463165)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.01E+00 Statistic Test p-value:3.83E-02; Z-score:2.51E-01

Methylation in Case

6.78E-01 (Median) Methylation in Control 6.70E-01 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon19

Methylation of ABCA3 in breast cancer [ 3 ]

Location

3'UTR (cg06335980)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.08E+00 Statistic Test p-value:2.81E-03; Z-score:6.23E-01

Methylation in Case

7.86E-01 (Median) Methylation in Control 7.26E-01 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon20

Methylation of ABCA3 in breast cancer [ 3 ]

Location

3'UTR (cg07737682)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.04E+00 Statistic Test p-value:2.92E-02; Z-score:8.00E-01

Methylation in Case

7.08E-01 (Median) Methylation in Control 6.79E-01 (Median)

Studied Phenotype

Breast cancer[ ICD-11:2C60-2C6Z]

Experimental Material

Patient tissue samples

  Colon cancer

         10 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon1

Methylation of ABCA3 in colon adenocarcinoma [ 4 ]

Location

5'UTR (cg03363743)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.35E+00 Statistic Test p-value:3.62E-07; Z-score:2.62E+00

Methylation in Case

5.03E-01 (Median) Methylation in Control 3.73E-01 (Median)

Studied Phenotype

Colon cancer[ ICD-11:2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon2

Methylation of ABCA3 in colon adenocarcinoma [ 4 ]

Location

5'UTR (cg06250288)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.16E+00 Statistic Test p-value:8.05E-05; Z-score:-3.04E+00

Methylation in Case

6.18E-01 (Median) Methylation in Control 7.18E-01 (Median)

Studied Phenotype

Colon cancer[ ICD-11:2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon3

Methylation of ABCA3 in colon adenocarcinoma [ 4 ]

Location

TSS1500 (cg01183122)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.04E+00 Statistic Test p-value:4.27E-03; Z-score:-1.12E+00

Methylation in Case

8.13E-01 (Median) Methylation in Control 8.48E-01 (Median)

Studied Phenotype

Colon cancer[ ICD-11:2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon4

Methylation of ABCA3 in colon adenocarcinoma [ 4 ]

Location

TSS200 (cg25307168)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.17E+00 Statistic Test p-value:1.47E-07; Z-score:1.59E+00

Methylation in Case

5.35E-01 (Median) Methylation in Control 4.58E-01 (Median)

Studied Phenotype

Colon cancer[ ICD-11:2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon5

Methylation of ABCA3 in colon adenocarcinoma [ 4 ]

Location

TSS200 (cg02330121)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:4.13E+00 Statistic Test p-value:9.01E-07; Z-score:1.11E+01

Methylation in Case

2.78E-01 (Median) Methylation in Control 6.72E-02 (Median)

Studied Phenotype

Colon cancer[ ICD-11:2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon6

Methylation of ABCA3 in colon adenocarcinoma [ 4 ]

Location

TSS200 (cg16843423)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:2.91E+00 Statistic Test p-value:1.02E-03; Z-score:4.47E+00

Methylation in Case

1.37E-01 (Median) Methylation in Control 4.71E-02 (Median)

Studied Phenotype

Colon cancer[ ICD-11:2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon7

Methylation of ABCA3 in colon adenocarcinoma [ 4 ]

Location

Body (cg04849842)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:2.22E+00 Statistic Test p-value:4.27E-10; Z-score:5.72E+00

Methylation in Case

6.01E-01 (Median) Methylation in Control 2.70E-01 (Median)

Studied Phenotype

Colon cancer[ ICD-11:2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon8

Methylation of ABCA3 in colon adenocarcinoma [ 4 ]

Location

Body (cg03645007)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.08E+00 Statistic Test p-value:6.84E-04; Z-score:-1.81E+00

Methylation in Case

7.00E-01 (Median) Methylation in Control 7.56E-01 (Median)

Studied Phenotype

Colon cancer[ ICD-11:2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon9

Methylation of ABCA3 in colon adenocarcinoma [ 4 ]

Location

Body (cg06094523)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.08E+00 Statistic Test p-value:1.29E-03; Z-score:-7.13E-01

Methylation in Case

3.85E-01 (Median) Methylation in Control 4.16E-01 (Median)

Studied Phenotype

Colon cancer[ ICD-11:2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon10

Methylation of ABCA3 in colon adenocarcinoma [ 4 ]

Location

Body (cg21974358)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.17E+00 Statistic Test p-value:3.76E-03; Z-score:1.06E+00

Methylation in Case

6.51E-01 (Median) Methylation in Control 5.56E-01 (Median)

Studied Phenotype

Colon cancer[ ICD-11:2B90]

Experimental Material

Patient tissue samples

  Colorectal cancer

         33 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon1

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

5'UTR (cg08644341)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.05E+00 Statistic Test p-value:1.60E-06; Z-score:-2.26E+00

Methylation in Case

8.66E-01 (Median) Methylation in Control 9.06E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon2

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

5'UTR (cg06250288)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.07E+00 Statistic Test p-value:2.33E-06; Z-score:-1.57E+00

Methylation in Case

7.87E-01 (Median) Methylation in Control 8.41E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon3

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

5'UTR (cg08900781)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.01E+00 Statistic Test p-value:1.71E-03; Z-score:-8.81E-01

Methylation in Case

9.40E-01 (Median) Methylation in Control 9.48E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon4

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg00644103)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.14E+00 Statistic Test p-value:3.56E-11; Z-score:-4.32E+00

Methylation in Case

7.69E-01 (Median) Methylation in Control 8.74E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon5

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg19754709)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.12E+00 Statistic Test p-value:3.82E-10; Z-score:-3.86E+00

Methylation in Case

7.73E-01 (Median) Methylation in Control 8.69E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon6

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg04058100)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.15E+00 Statistic Test p-value:6.24E-10; Z-score:-4.75E+00

Methylation in Case

7.74E-01 (Median) Methylation in Control 8.90E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon7

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg04149930)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.09E+00 Statistic Test p-value:3.60E-09; Z-score:-2.53E+00

Methylation in Case

7.92E-01 (Median) Methylation in Control 8.65E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon8

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg02715407)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.05E+00 Statistic Test p-value:3.11E-08; Z-score:-2.92E+00

Methylation in Case

8.58E-01 (Median) Methylation in Control 9.00E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon9

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg09481056)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.03E+00 Statistic Test p-value:7.29E-08; Z-score:-2.00E+00

Methylation in Case

8.79E-01 (Median) Methylation in Control 9.10E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon10

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg08490220)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.10E+00 Statistic Test p-value:1.12E-07; Z-score:-1.85E+00

Methylation in Case

6.99E-01 (Median) Methylation in Control 7.71E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon11

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg09945896)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.08E+00 Statistic Test p-value:4.76E-07; Z-score:-3.09E+00

Methylation in Case

8.12E-01 (Median) Methylation in Control 8.73E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon12

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg09681286)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.11E+00 Statistic Test p-value:6.34E-07; Z-score:-1.96E+00

Methylation in Case

7.85E-01 (Median) Methylation in Control 8.73E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon13

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg01550915)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.05E+00 Statistic Test p-value:6.76E-07; Z-score:-1.45E+00

Methylation in Case

7.99E-01 (Median) Methylation in Control 8.38E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon14

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg05218653)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.02E+00 Statistic Test p-value:1.38E-05; Z-score:-1.16E+00

Methylation in Case

9.53E-01 (Median) Methylation in Control 9.69E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon15

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg09954729)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.04E+00 Statistic Test p-value:2.17E-05; Z-score:-1.18E+00

Methylation in Case

9.06E-01 (Median) Methylation in Control 9.39E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon16

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg08131081)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.01E+00 Statistic Test p-value:2.17E-05; Z-score:-1.46E+00

Methylation in Case

9.33E-01 (Median) Methylation in Control 9.44E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon17

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg07301574)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.00E+00 Statistic Test p-value:7.53E-05; Z-score:-5.11E-02

Methylation in Case

9.17E-01 (Median) Methylation in Control 9.17E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon18

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg16463165)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.06E+00 Statistic Test p-value:8.38E-05; Z-score:-1.35E+00

Methylation in Case

8.07E-01 (Median) Methylation in Control 8.51E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon19

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg00039478)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.00E+00 Statistic Test p-value:1.66E-04; Z-score:-4.26E-01

Methylation in Case

9.07E-01 (Median) Methylation in Control 9.11E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon20

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg06780216)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.01E+00 Statistic Test p-value:3.37E-04; Z-score:-1.44E+00

Methylation in Case

9.42E-01 (Median) Methylation in Control 9.53E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon21

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg01278797)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.02E+00 Statistic Test p-value:4.40E-04; Z-score:-2.35E+00

Methylation in Case

9.16E-01 (Median) Methylation in Control 9.33E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon22

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg05814755)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.02E+00 Statistic Test p-value:4.94E-04; Z-score:-1.11E+00

Methylation in Case

9.15E-01 (Median) Methylation in Control 9.31E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon23

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg09263316)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.02E+00 Statistic Test p-value:6.21E-04; Z-score:-5.96E-01

Methylation in Case

8.85E-01 (Median) Methylation in Control 9.03E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon24

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg06933862)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.01E+00 Statistic Test p-value:2.75E-03; Z-score:-8.34E-01

Methylation in Case

9.52E-01 (Median) Methylation in Control 9.58E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon25

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg07701514)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.03E+00 Statistic Test p-value:3.16E-03; Z-score:-6.23E-01

Methylation in Case

7.78E-01 (Median) Methylation in Control 8.02E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon26

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg10125193)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.01E+00 Statistic Test p-value:4.00E-03; Z-score:-6.12E-01

Methylation in Case

8.93E-01 (Median) Methylation in Control 9.04E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon27

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg02257312)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.01E+00 Statistic Test p-value:7.76E-03; Z-score:-8.30E-01

Methylation in Case

9.27E-01 (Median) Methylation in Control 9.35E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon28

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg07753939)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.00E+00 Statistic Test p-value:3.44E-02; Z-score:2.08E-02

Methylation in Case

9.65E-01 (Median) Methylation in Control 9.64E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon29

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg05824333)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.00E+00 Statistic Test p-value:3.81E-02; Z-score:-7.23E-02

Methylation in Case

9.66E-01 (Median) Methylation in Control 9.67E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon30

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg02124920)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.01E+00 Statistic Test p-value:4.04E-02; Z-score:-2.36E-01

Methylation in Case

8.90E-01 (Median) Methylation in Control 8.96E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon31

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

3'UTR (cg07737682)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.05E+00 Statistic Test p-value:2.13E-06; Z-score:-2.53E+00

Methylation in Case

8.39E-01 (Median) Methylation in Control 8.77E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon32

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

3'UTR (cg10154010)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.02E+00 Statistic Test p-value:9.81E-03; Z-score:-9.16E-01

Methylation in Case

9.27E-01 (Median) Methylation in Control 9.45E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon33

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

3'UTR (cg06335980)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.01E+00 Statistic Test p-value:2.75E-02; Z-score:-2.25E-01

Methylation in Case

8.34E-01 (Median) Methylation in Control 8.40E-01 (Median)

Studied Phenotype

Colorectal cancer[ ICD-11:2B91]

Experimental Material

Patient tissue samples

  Hepatocellular carcinoma

         34 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon1

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

5'UTR (cg08900781)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.11E+00 Statistic Test p-value:2.80E-08; Z-score:-2.20E+00

Methylation in Case

7.65E-01 (Median) Methylation in Control 8.47E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon2

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

5'UTR (cg04783228)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.07E+00 Statistic Test p-value:5.60E-08; Z-score:-9.48E-01

Methylation in Case

7.52E-01 (Median) Methylation in Control 8.06E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon3

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

5'UTR (cg02543796)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.01E+00 Statistic Test p-value:5.69E-04; Z-score:-7.48E-01

Methylation in Case

8.09E-01 (Median) Methylation in Control 8.21E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon4

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

TSS200 (cg13286281)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.94E+00 Statistic Test p-value:2.28E-10; Z-score:4.15E+00

Methylation in Case

2.92E-01 (Median) Methylation in Control 1.50E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon5

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg02883668)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.72E+00 Statistic Test p-value:1.33E-17; Z-score:-2.57E+00

Methylation in Case

2.20E-01 (Median) Methylation in Control 3.79E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon6

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg10246871)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.52E+00 Statistic Test p-value:3.82E-17; Z-score:-1.33E+01

Methylation in Case

5.68E-01 (Median) Methylation in Control 8.65E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon7

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg16455444)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.92E+00 Statistic Test p-value:1.38E-16; Z-score:-6.12E+00

Methylation in Case

3.08E-01 (Median) Methylation in Control 5.92E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon8

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg23093692)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.62E+00 Statistic Test p-value:2.04E-16; Z-score:-4.02E+00

Methylation in Case

4.77E-01 (Median) Methylation in Control 7.73E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon9

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg16535035)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.51E+00 Statistic Test p-value:1.33E-15; Z-score:-4.82E+00

Methylation in Case

5.04E-01 (Median) Methylation in Control 7.61E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon10

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg17655346)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.42E+00 Statistic Test p-value:6.87E-14; Z-score:-6.11E+00

Methylation in Case

5.54E-01 (Median) Methylation in Control 7.88E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon11

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg02287939)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.27E+00 Statistic Test p-value:5.21E-12; Z-score:-1.58E+01

Methylation in Case

7.66E-01 (Median) Methylation in Control 9.75E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon12

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg04912273)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.08E+00 Statistic Test p-value:5.86E-12; Z-score:1.59E+00

Methylation in Case

7.61E-01 (Median) Methylation in Control 7.03E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon13

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg16523422)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.29E+00 Statistic Test p-value:4.67E-11; Z-score:-2.97E+00

Methylation in Case

6.21E-01 (Median) Methylation in Control 8.01E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon14

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg10810847)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.91E+00 Statistic Test p-value:1.01E-10; Z-score:5.49E+00

Methylation in Case

3.46E-01 (Median) Methylation in Control 1.82E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon15

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg08943004)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.12E+00 Statistic Test p-value:1.41E-10; Z-score:-6.28E+00

Methylation in Case

8.52E-01 (Median) Methylation in Control 9.55E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon16

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg02715407)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.19E+00 Statistic Test p-value:2.34E-09; Z-score:-3.42E+00

Methylation in Case

6.50E-01 (Median) Methylation in Control 7.71E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon17

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg02257312)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.14E+00 Statistic Test p-value:3.18E-09; Z-score:-5.03E+00

Methylation in Case

7.61E-01 (Median) Methylation in Control 8.67E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon18

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg09263316)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.16E+00 Statistic Test p-value:1.44E-08; Z-score:-2.00E+00

Methylation in Case

6.85E-01 (Median) Methylation in Control 7.95E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon19

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg01278797)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.12E+00 Statistic Test p-value:2.17E-08; Z-score:-3.17E+00

Methylation in Case

7.63E-01 (Median) Methylation in Control 8.55E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon20

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg05093254)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.08E+00 Statistic Test p-value:4.27E-08; Z-score:-6.51E+00

Methylation in Case

9.02E-01 (Median) Methylation in Control 9.71E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon21

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg10125193)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.12E+00 Statistic Test p-value:8.33E-08; Z-score:-2.73E+00

Methylation in Case

7.31E-01 (Median) Methylation in Control 8.22E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon22

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg05824333)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.04E+00 Statistic Test p-value:4.26E-07; Z-score:-4.04E+00

Methylation in Case

9.16E-01 (Median) Methylation in Control 9.54E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon23

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg05814755)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.05E+00 Statistic Test p-value:5.10E-07; Z-score:-1.59E+00

Methylation in Case

7.86E-01 (Median) Methylation in Control 8.28E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon24

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg07301574)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.06E+00 Statistic Test p-value:1.31E-06; Z-score:-2.42E+00

Methylation in Case

7.41E-01 (Median) Methylation in Control 7.86E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon25

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg09632163)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.03E+00 Statistic Test p-value:2.00E-06; Z-score:-1.63E+00

Methylation in Case

9.24E-01 (Median) Methylation in Control 9.54E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon26

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg09481056)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.07E+00 Statistic Test p-value:2.10E-06; Z-score:-1.42E+00

Methylation in Case

7.62E-01 (Median) Methylation in Control 8.15E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon27

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg08449748)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.10E+00 Statistic Test p-value:2.10E-06; Z-score:-1.45E+00

Methylation in Case

6.72E-01 (Median) Methylation in Control 7.37E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon28

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg07753939)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.04E+00 Statistic Test p-value:3.28E-06; Z-score:-7.80E-01

Methylation in Case

9.30E-01 (Median) Methylation in Control 9.63E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon29

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg05147509)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.05E+00 Statistic Test p-value:5.36E-05; Z-score:-3.96E-01

Methylation in Case

7.78E-01 (Median) Methylation in Control 8.19E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon30

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg01491428)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.49E+00 Statistic Test p-value:2.95E-04; Z-score:-7.03E-01

Methylation in Case

3.66E-01 (Median) Methylation in Control 5.45E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon31

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg00039478)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.02E+00 Statistic Test p-value:1.90E-03; Z-score:-1.69E-01

Methylation in Case

7.61E-01 (Median) Methylation in Control 7.78E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon32

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg20915212)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.01E+00 Statistic Test p-value:2.95E-02; Z-score:2.01E-01

Methylation in Case

6.88E-01 (Median) Methylation in Control 6.82E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon33

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

3'UTR (cg07737682)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.17E+00 Statistic Test p-value:3.72E-08; Z-score:-3.19E+00

Methylation in Case

5.84E-01 (Median) Methylation in Control 6.84E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon34

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

3'UTR (cg10154010)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.01E+00 Statistic Test p-value:2.21E-04; Z-score:-2.84E-01

Methylation in Case

8.90E-01 (Median) Methylation in Control 9.01E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma[ ICD-11:2C12.02]

Experimental Material

Patient tissue samples

  HIV infection

         16 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon1

Methylation of ABCA3 in HIV infection [ 7 ]

Location

5'UTR (cg06250288)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.04E+00 Statistic Test p-value:3.41E-03; Z-score:-1.03E+00

Methylation in Case

7.96E-01 (Median) Methylation in Control 8.25E-01 (Median)

Studied Phenotype

HIV infection[ ICD-11:1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon2

Methylation of ABCA3 in HIV infection [ 7 ]

Location

5'UTR (cg08644341)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.02E+00 Statistic Test p-value:8.18E-03; Z-score:-7.14E-01

Methylation in Case

9.05E-01 (Median) Methylation in Control 9.20E-01 (Median)

Studied Phenotype

HIV infection[ ICD-11:1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon3

Methylation of ABCA3 in HIV infection [ 7 ]

Location

Body (cg09481056)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.19E+00 Statistic Test p-value:3.22E-18; Z-score:3.15E+00

Methylation in Case

8.08E-01 (Median) Methylation in Control 6.81E-01 (Median)

Studied Phenotype

HIV infection[ ICD-11:1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon4

Methylation of ABCA3 in HIV infection [ 7 ]

Location

Body (cg10125193)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.03E+00 Statistic Test p-value:1.38E-07; Z-score:1.04E+00

Methylation in Case

8.62E-01 (Median) Methylation in Control 8.37E-01 (Median)

Studied Phenotype

HIV infection[ ICD-11:1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon5

Methylation of ABCA3 in HIV infection [ 7 ]

Location

Body (cg08449748)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.07E+00 Statistic Test p-value:6.68E-07; Z-score:1.41E+00

Methylation in Case

7.90E-01 (Median) Methylation in Control 7.40E-01 (Median)

Studied Phenotype

HIV infection[ ICD-11:1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon6

Methylation of ABCA3 in HIV infection [ 7 ]

Location

Body (cg09263316)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.05E+00 Statistic Test p-value:1.38E-06; Z-score:-1.85E+00

Methylation in Case

8.66E-01 (Median) Methylation in Control 9.06E-01 (Median)

Studied Phenotype

HIV infection[ ICD-11:1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon7

Methylation of ABCA3 in HIV infection [ 7 ]

Location

Body (cg05147509)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.03E+00 Statistic Test p-value:2.63E-04; Z-score:7.71E-01

Methylation in Case

8.61E-01 (Median) Methylation in Control 8.37E-01 (Median)

Studied Phenotype

HIV infection[ ICD-11:1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon8

Methylation of ABCA3 in HIV infection [ 7 ]

Location

Body (cg08490220)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.05E+00 Statistic Test p-value:2.71E-04; Z-score:-1.59E+00

Methylation in Case

7.48E-01 (Median) Methylation in Control 7.87E-01 (Median)

Studied Phenotype

HIV infection[ ICD-11:1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon9

Methylation of ABCA3 in HIV infection [ 7 ]

Location

Body (cg02715407)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.03E+00 Statistic Test p-value:3.08E-03; Z-score:-8.01E-01

Methylation in Case

8.25E-01 (Median) Methylation in Control 8.46E-01 (Median)

Studied Phenotype

HIV infection[ ICD-11:1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon10

Methylation of ABCA3 in HIV infection [ 7 ]

Location

Body (cg05093254)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.00E+00 Statistic Test p-value:4.88E-03; Z-score:-8.67E-01

Methylation in Case

9.91E-01 (Median) Methylation in Control 9.94E-01 (Median)

Studied Phenotype

HIV infection[ ICD-11:1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon11

Methylation of ABCA3 in HIV infection [ 7 ]

Location

Body (cg04058100)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.03E+00 Statistic Test p-value:1.16E-02; Z-score:-1.08E+00

Methylation in Case

8.63E-01 (Median) Methylation in Control 8.90E-01 (Median)

Studied Phenotype

HIV infection[ ICD-11:1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon12

Methylation of ABCA3 in HIV infection [ 7 ]

Location

Body (cg07753939)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.00E+00 Statistic Test p-value:1.56E-02; Z-score:4.64E-01

Methylation in Case

9.81E-01 (Median) Methylation in Control 9.76E-01 (Median)

Studied Phenotype

HIV infection[ ICD-11:1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon13

Methylation of ABCA3 in HIV infection [ 7 ]

Location

Body (cg07301574)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.01E+00 Statistic Test p-value:1.65E-02; Z-score:3.87E-01

Methylation in Case

8.31E-01 (Median) Methylation in Control 8.23E-01 (Median)

Studied Phenotype

HIV infection[ ICD-11:1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon14

Methylation of ABCA3 in HIV infection [ 7 ]

Location

Body (cg09632163)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.01E+00 Statistic Test p-value:1.92E-02; Z-score:6.66E-01

Methylation in Case

9.37E-01 (Median) Methylation in Control 9.25E-01 (Median)

Studied Phenotype

HIV infection[ ICD-11:1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon15

Methylation of ABCA3 in HIV infection [ 7 ]

Location

Body (cg19754709)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.02E+00 Statistic Test p-value:2.57E-02; Z-score:-7.62E-01

Methylation in Case

8.13E-01 (Median) Methylation in Control 8.33E-01 (Median)

Studied Phenotype

HIV infection[ ICD-11:1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon16

Methylation of ABCA3 in HIV infection [ 7 ]

Location

Body (cg05218653)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.00E+00 Statistic Test p-value:4.36E-02; Z-score:-1.61E-01

Methylation in Case

9.91E-01 (Median) Methylation in Control 9.91E-01 (Median)

Studied Phenotype

HIV infection[ ICD-11:1C62.Z]

Experimental Material

Patient tissue samples

  Lung adenocarcinoma

         13 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon1

Methylation of ABCA3 in lung adenocarcinoma [ 8 ]

Location

5'UTR (cg08900781)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.07E+00 Statistic Test p-value:5.86E-03; Z-score:1.65E+00

Methylation in Case

8.44E-01 (Median) Methylation in Control 7.90E-01 (Median)

Studied Phenotype

Lung adenocarcinoma[ ICD-11:2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon2

Methylation of ABCA3 in lung adenocarcinoma [ 8 ]

Location

5'UTR (cg02543796)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.04E+00 Statistic Test p-value:2.67E-02; Z-score:7.42E-01

Methylation in Case

8.06E-01 (Median) Methylation in Control 7.76E-01 (Median)

Studied Phenotype

Lung adenocarcinoma[ ICD-11:2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon3

Methylation of ABCA3 in lung adenocarcinoma [ 8 ]

Location

Body (cg19754709)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.06E+00 Statistic Test p-value:1.03E-03; Z-score:-2.07E+00

Methylation in Case

7.77E-01 (Median) Methylation in Control 8.21E-01 (Median)

Studied Phenotype

Lung adenocarcinoma[ ICD-11:2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon4

Methylation of ABCA3 in lung adenocarcinoma [ 8 ]

Location

Body (cg08449748)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.08E+00 Statistic Test p-value:4.89E-03; Z-score:1.29E+00

Methylation in Case

7.48E-01 (Median) Methylation in Control 6.94E-01 (Median)

Studied Phenotype

Lung adenocarcinoma[ ICD-11:2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon5

Methylation of ABCA3 in lung adenocarcinoma [ 8 ]

Location

Body (cg09263316)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.06E+00 Statistic Test p-value:6.69E-03; Z-score:-3.41E+00

Methylation in Case

8.30E-01 (Median) Methylation in Control 8.77E-01 (Median)

Studied Phenotype

Lung adenocarcinoma[ ICD-11:2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon6

Methylation of ABCA3 in lung adenocarcinoma [ 8 ]

Location

Body (cg07753939)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.06E+00 Statistic Test p-value:6.87E-03; Z-score:1.87E+00

Methylation in Case

9.21E-01 (Median) Methylation in Control 8.69E-01 (Median)

Studied Phenotype

Lung adenocarcinoma[ ICD-11:2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon7

Methylation of ABCA3 in lung adenocarcinoma [ 8 ]

Location

Body (cg04058100)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.08E+00 Statistic Test p-value:8.98E-03; Z-score:-6.39E+00

Methylation in Case

7.90E-01 (Median) Methylation in Control 8.54E-01 (Median)

Studied Phenotype

Lung adenocarcinoma[ ICD-11:2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon8

Methylation of ABCA3 in lung adenocarcinoma [ 8 ]

Location

Body (cg04149930)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.10E+00 Statistic Test p-value:1.53E-02; Z-score:-3.35E+00

Methylation in Case

7.40E-01 (Median) Methylation in Control 8.18E-01 (Median)

Studied Phenotype

Lung adenocarcinoma[ ICD-11:2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon9

Methylation of ABCA3 in lung adenocarcinoma [ 8 ]

Location

Body (cg00644103)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.04E+00 Statistic Test p-value:2.69E-02; Z-score:-2.48E+00

Methylation in Case

8.04E-01 (Median) Methylation in Control 8.34E-01 (Median)

Studied Phenotype

Lung adenocarcinoma[ ICD-11:2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon10

Methylation of ABCA3 in lung adenocarcinoma [ 8 ]

Location

Body (cg07701514)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.05E+00 Statistic Test p-value:3.36E-02; Z-score:8.23E-01

Methylation in Case

7.94E-01 (Median) Methylation in Control 7.58E-01 (Median)

Studied Phenotype

Lung adenocarcinoma[ ICD-11:2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon11

Methylation of ABCA3 in lung adenocarcinoma [ 8 ]

Location

Body (cg06933862)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.01E+00 Statistic Test p-value:3.75E-02; Z-score:-8.77E-01

Methylation in Case

9.20E-01 (Median) Methylation in Control 9.27E-01 (Median)

Studied Phenotype

Lung adenocarcinoma[ ICD-11:2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon12

Methylation of ABCA3 in lung adenocarcinoma [ 8 ]

Location

Body (cg09954729)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.02E+00 Statistic Test p-value:3.82E-02; Z-score:-1.95E+00

Methylation in Case

9.45E-01 (Median) Methylation in Control 9.60E-01 (Median)

Studied Phenotype

Lung adenocarcinoma[ ICD-11:2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon13

Methylation of ABCA3 in lung adenocarcinoma [ 8 ]

Location

Body (cg01278797)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.02E+00 Statistic Test p-value:4.07E-02; Z-score:-1.09E+00

Methylation in Case

8.68E-01 (Median) Methylation in Control 8.85E-01 (Median)

Studied Phenotype

Lung adenocarcinoma[ ICD-11:2C25.0]

Experimental Material

Patient tissue samples

  Panic disorder

           4 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon1

Methylation of ABCA3 in panic disorder [ 9 ]

Location

5'UTR (cg08900781)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.05E+00 Statistic Test p-value:2.83E-02; Z-score:3.79E-01

Methylation in Case

3.67E+00 (Median) Methylation in Control 3.50E+00 (Median)

Studied Phenotype

Panic disorder[ ICD-11:6B01]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon2

Methylation of ABCA3 in panic disorder [ 9 ]

Location

Body (cg06933862)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.04E+00 Statistic Test p-value:7.79E-03; Z-score:-4.72E-01

Methylation in Case

4.53E+00 (Median) Methylation in Control 4.69E+00 (Median)

Studied Phenotype

Panic disorder[ ICD-11:6B01]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon3

Methylation of ABCA3 in panic disorder [ 9 ]

Location

Body (cg16463165)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.12E+00 Statistic Test p-value:1.35E-02; Z-score:3.92E-01

Methylation in Case

1.86E+00 (Median) Methylation in Control 1.67E+00 (Median)

Studied Phenotype

Panic disorder[ ICD-11:6B01]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon4

Methylation of ABCA3 in panic disorder [ 9 ]

Location

Body (cg00039478)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.11E+00 Statistic Test p-value:2.12E-02; Z-score:4.64E-01

Methylation in Case

1.72E+00 (Median) Methylation in Control 1.55E+00 (Median)

Studied Phenotype

Panic disorder[ ICD-11:6B01]

Experimental Material

Patient tissue samples

  Papillary thyroid cancer

         13 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon1

Methylation of ABCA3 in papillary thyroid cancer [ 10 ]

Location

5'UTR (cg08900781)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.15E+00 Statistic Test p-value:6.08E-06; Z-score:-1.33E+00

Methylation in Case

6.99E-01 (Median) Methylation in Control 8.03E-01 (Median)

Studied Phenotype

Papillary thyroid cancer[ ICD-11:2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon2

Methylation of ABCA3 in papillary thyroid cancer [ 10 ]

Location

Body (cg05147509)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.07E+00 Statistic Test p-value:2.80E-07; Z-score:1.51E+00

Methylation in Case

8.19E-01 (Median) Methylation in Control 7.69E-01 (Median)

Studied Phenotype

Papillary thyroid cancer[ ICD-11:2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon3

Methylation of ABCA3 in papillary thyroid cancer [ 10 ]

Location

Body (cg00039478)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.02E+00 Statistic Test p-value:1.01E-04; Z-score:-7.42E-01

Methylation in Case

8.36E-01 (Median) Methylation in Control 8.54E-01 (Median)

Studied Phenotype

Papillary thyroid cancer[ ICD-11:2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon4

Methylation of ABCA3 in papillary thyroid cancer [ 10 ]

Location

Body (cg08131081)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.01E+00 Statistic Test p-value:3.41E-04; Z-score:-9.00E-01

Methylation in Case

9.09E-01 (Median) Methylation in Control 9.20E-01 (Median)

Studied Phenotype

Papillary thyroid cancer[ ICD-11:2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon5

Methylation of ABCA3 in papillary thyroid cancer [ 10 ]

Location

Body (cg02124920)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.02E+00 Statistic Test p-value:4.74E-04; Z-score:4.64E-01

Methylation in Case

8.25E-01 (Median) Methylation in Control 8.12E-01 (Median)

Studied Phenotype

Papillary thyroid cancer[ ICD-11:2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon6

Methylation of ABCA3 in papillary thyroid cancer [ 10 ]

Location

Body (cg06780216)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.02E+00 Statistic Test p-value:6.22E-04; Z-score:7.52E-01

Methylation in Case

8.93E-01 (Median) Methylation in Control 8.74E-01 (Median)

Studied Phenotype

Papillary thyroid cancer[ ICD-11:2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon7

Methylation of ABCA3 in papillary thyroid cancer [ 10 ]

Location

Body (cg02715407)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.01E+00 Statistic Test p-value:3.93E-03; Z-score:-4.68E-01

Methylation in Case

8.76E-01 (Median) Methylation in Control 8.86E-01 (Median)

Studied Phenotype

Papillary thyroid cancer[ ICD-11:2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon8

Methylation of ABCA3 in papillary thyroid cancer [ 10 ]

Location

Body (cg08490220)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.02E+00 Statistic Test p-value:6.46E-03; Z-score:-5.25E-01

Methylation in Case

7.60E-01 (Median) Methylation in Control 7.76E-01 (Median)

Studied Phenotype

Papillary thyroid cancer[ ICD-11:2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon9

Methylation of ABCA3 in papillary thyroid cancer [ 10 ]

Location

Body (cg01278797)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.01E+00 Statistic Test p-value:1.07E-02; Z-score:-6.58E-01

Methylation in Case

9.09E-01 (Median) Methylation in Control 9.20E-01 (Median)

Studied Phenotype

Papillary thyroid cancer[ ICD-11:2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon10

Methylation of ABCA3 in papillary thyroid cancer [ 10 ]

Location

Body (cg07753939)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.01E+00 Statistic Test p-value:1.34E-02; Z-score:3.57E-01

Methylation in Case

9.14E-01 (Median) Methylation in Control 9.08E-01 (Median)

Studied Phenotype

Papillary thyroid cancer[ ICD-11:2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon11

Methylation of ABCA3 in papillary thyroid cancer [ 10 ]

Location

Body (cg16463165)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.03E+00 Statistic Test p-value:1.45E-02; Z-score:5.40E-01

Methylation in Case

7.37E-01 (Median) Methylation in Control 7.13E-01 (Median)

Studied Phenotype

Papillary thyroid cancer[ ICD-11:2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon12

Methylation of ABCA3 in papillary thyroid cancer [ 10 ]

Location

Body (cg04149930)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.01E+00 Statistic Test p-value:2.76E-02; Z-score:-1.94E-01

Methylation in Case

9.05E-01 (Median) Methylation in Control 9.11E-01 (Median)

Studied Phenotype

Papillary thyroid cancer[ ICD-11:2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon13

Methylation of ABCA3 in papillary thyroid cancer [ 10 ]

Location

Body (cg08449748)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.04E+00 Statistic Test p-value:2.88E-02; Z-score:5.42E-01

Methylation in Case

7.50E-01 (Median) Methylation in Control 7.21E-01 (Median)

Studied Phenotype

Papillary thyroid cancer[ ICD-11:2D10.1]

Experimental Material

Patient tissue samples

  Systemic lupus erythematosus

         11 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon1

Methylation of ABCA3 in systemic lupus erythematosus [ 11 ]

Location

5'UTR (cg06250288)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.01E+00 Statistic Test p-value:1.76E-03; Z-score:-1.18E-01

Methylation in Case

8.22E-01 (Median) Methylation in Control 8.27E-01 (Median)

Studied Phenotype

Systemic lupus erythematosus[ ICD-11:4A40.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon2

Methylation of ABCA3 in systemic lupus erythematosus [ 11 ]

Location

5'UTR (cg08644341)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.00E+00 Statistic Test p-value:2.90E-02; Z-score:-1.21E-01

Methylation in Case

8.96E-01 (Median) Methylation in Control 9.00E-01 (Median)

Studied Phenotype

Systemic lupus erythematosus[ ICD-11:4A40.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon3

Methylation of ABCA3 in systemic lupus erythematosus [ 11 ]

Location

Body (cg09632163)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.00E+00 Statistic Test p-value:5.54E-03; Z-score:-1.46E-01

Methylation in Case

9.28E-01 (Median) Methylation in Control 9.31E-01 (Median)

Studied Phenotype

Systemic lupus erythematosus[ ICD-11:4A40.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon4

Methylation of ABCA3 in systemic lupus erythematosus [ 11 ]

Location

Body (cg04058100)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.01E+00 Statistic Test p-value:5.84E-03; Z-score:-2.33E-01

Methylation in Case

8.50E-01 (Median) Methylation in Control 8.61E-01 (Median)

Studied Phenotype

Systemic lupus erythematosus[ ICD-11:4A40.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon5

Methylation of ABCA3 in systemic lupus erythematosus [ 11 ]

Location

Body (cg08322747)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.00E+00 Statistic Test p-value:8.42E-03; Z-score:-2.02E-01

Methylation in Case

9.62E-01 (Median) Methylation in Control 9.64E-01 (Median)

Studied Phenotype

Systemic lupus erythematosus[ ICD-11:4A40.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon6

Methylation of ABCA3 in systemic lupus erythematosus [ 11 ]

Location

Body (cg01491428)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.01E+00 Statistic Test p-value:9.47E-03; Z-score:-7.72E-02

Methylation in Case

8.16E-01 (Median) Methylation in Control 8.28E-01 (Median)

Studied Phenotype

Systemic lupus erythematosus[ ICD-11:4A40.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon7

Methylation of ABCA3 in systemic lupus erythematosus [ 11 ]

Location

Body (cg01278797)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.01E+00 Statistic Test p-value:1.46E-02; Z-score:-1.94E-01

Methylation in Case

8.95E-01 (Median) Methylation in Control 9.00E-01 (Median)

Studied Phenotype

Systemic lupus erythematosus[ ICD-11:4A40.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon8

Methylation of ABCA3 in systemic lupus erythematosus [ 11 ]

Location

Body (cg02715407)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.01E+00 Statistic Test p-value:2.92E-02; Z-score:-1.89E-01

Methylation in Case

8.39E-01 (Median) Methylation in Control 8.49E-01 (Median)

Studied Phenotype

Systemic lupus erythematosus[ ICD-11:4A40.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon9

Methylation of ABCA3 in systemic lupus erythematosus [ 11 ]

Location

Body (cg02257312)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.00E+00 Statistic Test p-value:3.45E-02; Z-score:-2.02E-01

Methylation in Case

9.21E-01 (Median) Methylation in Control 9.25E-01 (Median)

Studied Phenotype

Systemic lupus erythematosus[ ICD-11:4A40.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon10

Methylation of ABCA3 in systemic lupus erythematosus [ 11 ]

Location

Body (cg06780216)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.00E+00 Statistic Test p-value:4.29E-02; Z-score:-8.84E-02

Methylation in Case

9.44E-01 (Median) Methylation in Control 9.45E-01 (Median)

Studied Phenotype

Systemic lupus erythematosus[ ICD-11:4A40.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon11

Methylation of ABCA3 in systemic lupus erythematosus [ 11 ]

Location

3'UTR (cg07737682)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.01E+00 Statistic Test p-value:4.52E-02; Z-score:-1.94E-01

Methylation in Case

8.28E-01 (Median) Methylation in Control 8.36E-01 (Median)

Studied Phenotype

Systemic lupus erythematosus[ ICD-11:4A40.0]

Experimental Material

Patient tissue samples

  Pancretic ductal adenocarcinoma

         18 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon1

Methylation of ABCA3 in pancretic ductal adenocarcinoma [ 12 ]

Location

TSS1500 (cg18290624)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.71E+00 Statistic Test p-value:7.35E-12; Z-score:2.34E+00

Methylation in Case

4.46E-01 (Median) Methylation in Control 2.61E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma[ ICD-11:2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon2

Methylation of ABCA3 in pancretic ductal adenocarcinoma [ 12 ]

Location

TSS1500 (cg23338195)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.07E+00 Statistic Test p-value:4.82E-06; Z-score:-7.51E-01

Methylation in Case

6.34E-01 (Median) Methylation in Control 6.78E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma[ ICD-11:2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon3

Methylation of ABCA3 in pancretic ductal adenocarcinoma [ 12 ]

Location

TSS1500 (cg14762670)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.10E+00 Statistic Test p-value:1.30E-03; Z-score:-7.29E-01

Methylation in Case

3.32E-01 (Median) Methylation in Control 3.65E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma[ ICD-11:2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon4

Methylation of ABCA3 in pancretic ductal adenocarcinoma [ 12 ]

Location

TSS1500 (cg21762534)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.22E+00 Statistic Test p-value:2.44E-03; Z-score:-6.99E-01

Methylation in Case

9.11E-02 (Median) Methylation in Control 1.12E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma[ ICD-11:2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon5

Methylation of ABCA3 in pancretic ductal adenocarcinoma [ 12 ]

Location

TSS1500 (cg15916061)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.20E+00 Statistic Test p-value:1.20E-02; Z-score:9.51E-01

Methylation in Case

5.42E-01 (Median) Methylation in Control 4.53E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma[ ICD-11:2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon6

Methylation of ABCA3 in pancretic ductal adenocarcinoma [ 12 ]

Location

TSS1500 (cg23053624)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.06E+00 Statistic Test p-value:1.68E-02; Z-score:-3.17E-01

Methylation in Case

8.11E-02 (Median) Methylation in Control 8.61E-02 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma[ ICD-11:2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon7

Methylation of ABCA3 in pancretic ductal adenocarcinoma [ 12 ]

Location

TSS200 (cg18555069)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.64E+00 Statistic Test p-value:3.66E-16; Z-score:1.95E+00

Methylation in Case

4.71E-02 (Median) Methylation in Control 2.88E-02 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma[ ICD-11:2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon8

Methylation of ABCA3 in pancretic ductal adenocarcinoma [ 12 ]

Location

TSS200 (cg23825213)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.11E+00 Statistic Test p-value:3.52E-04; Z-score:9.10E-01

Methylation in Case

6.86E-01 (Median) Methylation in Control 6.20E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma[ ICD-11:2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon9

Methylation of ABCA3 in pancretic ductal adenocarcinoma [ 12 ]

Location

Body (cg19980199)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.18E+00 Statistic Test p-value:7.91E-10; Z-score:1.83E+00

Methylation in Case

7.72E-01 (Median) Methylation in Control 6.56E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma[ ICD-11:2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon10

Methylation of ABCA3 in pancretic ductal adenocarcinoma [ 12 ]

Location

Body (cg02079831)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.11E+00 Statistic Test p-value:1.65E-06; Z-score:5.89E-01

Methylation in Case

2.84E-01 (Median) Methylation in Control 2.57E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma[ ICD-11:2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon11

Methylation of ABCA3 in pancretic ductal adenocarcinoma [ 12 ]

Location

Body (cg18445760)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.06E+00 Statistic Test p-value:1.77E-05; Z-score:9.44E-01

Methylation in Case

8.36E-01 (Median) Methylation in Control 7.88E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma[ ICD-11:2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon12

Methylation of ABCA3 in pancretic ductal adenocarcinoma [ 12 ]

Location

Body (cg04524933)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.06E+00 Statistic Test p-value:2.12E-04; Z-score:8.81E-01

Methylation in Case

9.10E-01 (Median) Methylation in Control 8.57E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma[ ICD-11:2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon13

Methylation of ABCA3 in pancretic ductal adenocarcinoma [ 12 ]

Location

Body (cg26090940)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.13E+00 Statistic Test p-value:3.80E-03; Z-score:7.49E-01

Methylation in Case

6.41E-01 (Median) Methylation in Control 5.69E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma[ ICD-11:2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon14

Methylation of ABCA3 in pancretic ductal adenocarcinoma [ 12 ]

Location

Body (cg07396272)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.07E+00 Statistic Test p-value:8.72E-03; Z-score:1.07E+00

Methylation in Case

8.13E-01 (Median) Methylation in Control 7.62E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma[ ICD-11:2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon15

Methylation of ABCA3 in pancretic ductal adenocarcinoma [ 12 ]

Location

Body (cg11977139)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.01E+00 Statistic Test p-value:1.10E-02; Z-score:-4.47E-01

Methylation in Case

8.62E-01 (Median) Methylation in Control 8.74E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma[ ICD-11:2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon16

Methylation of ABCA3 in pancretic ductal adenocarcinoma [ 12 ]

Location

Body (cg06342870)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.00E+00 Statistic Test p-value:1.44E-02; Z-score:-3.75E-01

Methylation in Case

9.09E-01 (Median) Methylation in Control 9.13E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma[ ICD-11:2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon17

Methylation of ABCA3 in pancretic ductal adenocarcinoma [ 12 ]

Location

Body (cg00153543)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.00E+00 Statistic Test p-value:4.89E-02; Z-score:-4.40E-03

Methylation in Case

6.90E-01 (Median) Methylation in Control 6.90E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma[ ICD-11:2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon18

Methylation of ABCA3 in pancretic ductal adenocarcinoma [ 12 ]

Location

3'UTR (cg20733663)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.03E+00 Statistic Test p-value:1.48E-04; Z-score:-5.69E-01

Methylation in Case

5.73E-01 (Median) Methylation in Control 5.92E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma[ ICD-11:2C10.0]

Experimental Material

Patient tissue samples

  Prostate cancer

           4 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon1

Methylation of ABCA3 in prostate cancer [ 13 ]

Location

TSS1500 (cg09941770)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:2.50E+00 Statistic Test p-value:2.66E-02; Z-score:1.44E+01

Methylation in Case

2.47E-01 (Median) Methylation in Control 9.89E-02 (Median)

Studied Phenotype

Prostate cancer[ ICD-11:2C82]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon2

Methylation of ABCA3 in prostate cancer [ 13 ]

Location

TSS200 (cg16552454)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:2.39E+00 Statistic Test p-value:1.28E-03; Z-score:3.95E+01

Methylation in Case

6.05E-01 (Median) Methylation in Control 2.53E-01 (Median)

Studied Phenotype

Prostate cancer[ ICD-11:2C82]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon3

Methylation of ABCA3 in prostate cancer [ 13 ]

Location

Body (cg09226986)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.58E+00 Statistic Test p-value:1.94E-03; Z-score:3.49E+00

Methylation in Case

7.89E-01 (Median) Methylation in Control 5.01E-01 (Median)

Studied Phenotype

Prostate cancer[ ICD-11:2C82]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon4

Methylation of ABCA3 in prostate cancer [ 13 ]

Location

Body (cg15992711)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.31E+00 Statistic Test p-value:3.10E-02; Z-score:-5.41E+00

Methylation in Case

4.00E-01 (Median) Methylation in Control 5.24E-01 (Median)

Studied Phenotype

Prostate cancer[ ICD-11:2C82]

Experimental Material

Patient tissue samples

  Renal cell carcinoma

         11 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon1

Methylation of ABCA3 in clear cell renal cell carcinoma [ 14 ]

Location

Body (cg05147509)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.08E+00 Statistic Test p-value:6.08E-16; Z-score:2.64E+00

Methylation in Case

8.71E-01 (Median) Methylation in Control 8.04E-01 (Median)

Studied Phenotype

Renal cell carcinoma[ ICD-11:2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon2

Methylation of ABCA3 in clear cell renal cell carcinoma [ 14 ]

Location

Body (cg10125193)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.03E+00 Statistic Test p-value:7.54E-09; Z-score:2.13E+00

Methylation in Case

9.32E-01 (Median) Methylation in Control 9.01E-01 (Median)

Studied Phenotype

Renal cell carcinoma[ ICD-11:2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon3

Methylation of ABCA3 in clear cell renal cell carcinoma [ 14 ]

Location

Body (cg05824333)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.01E+00 Statistic Test p-value:8.06E-08; Z-score:1.24E+00

Methylation in Case

9.72E-01 (Median) Methylation in Control 9.62E-01 (Median)

Studied Phenotype

Renal cell carcinoma[ ICD-11:2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon4

Methylation of ABCA3 in clear cell renal cell carcinoma [ 14 ]

Location

Body (cg09681286)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.21E+00 Statistic Test p-value:5.40E-07; Z-score:3.35E+00

Methylation in Case

8.96E-01 (Median) Methylation in Control 7.43E-01 (Median)

Studied Phenotype

Renal cell carcinoma[ ICD-11:2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon5

Methylation of ABCA3 in clear cell renal cell carcinoma [ 14 ]

Location

Body (cg09945896)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.07E+00 Statistic Test p-value:3.23E-04; Z-score:1.95E+00

Methylation in Case

8.76E-01 (Median) Methylation in Control 8.18E-01 (Median)

Studied Phenotype

Renal cell carcinoma[ ICD-11:2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon6

Methylation of ABCA3 in clear cell renal cell carcinoma [ 14 ]

Location

Body (cg08322747)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.00E+00 Statistic Test p-value:4.31E-03; Z-score:-4.20E-01

Methylation in Case

9.72E-01 (Median) Methylation in Control 9.74E-01 (Median)

Studied Phenotype

Renal cell carcinoma[ ICD-11:2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon7

Methylation of ABCA3 in clear cell renal cell carcinoma [ 14 ]

Location

Body (cg00039478)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.01E+00 Statistic Test p-value:6.48E-03; Z-score:-4.87E-01

Methylation in Case

8.82E-01 (Median) Methylation in Control 8.90E-01 (Median)

Studied Phenotype

Renal cell carcinoma[ ICD-11:2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon8

Methylation of ABCA3 in clear cell renal cell carcinoma [ 14 ]

Location

Body (cg07301574)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.07E+00 Statistic Test p-value:8.65E-03; Z-score:2.16E+00

Methylation in Case

9.06E-01 (Median) Methylation in Control 8.48E-01 (Median)

Studied Phenotype

Renal cell carcinoma[ ICD-11:2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon9

Methylation of ABCA3 in clear cell renal cell carcinoma [ 14 ]

Location

Body (cg08490220)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.02E+00 Statistic Test p-value:2.62E-02; Z-score:-5.22E-01

Methylation in Case

8.13E-01 (Median) Methylation in Control 8.27E-01 (Median)

Studied Phenotype

Renal cell carcinoma[ ICD-11:2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon10

Methylation of ABCA3 in clear cell renal cell carcinoma [ 14 ]

Location

Body (cg05654361)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.12E+00 Statistic Test p-value:2.94E-02; Z-score:1.69E+00

Methylation in Case

8.53E-01 (Median) Methylation in Control 7.61E-01 (Median)

Studied Phenotype

Renal cell carcinoma[ ICD-11:2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon11

Methylation of ABCA3 in clear cell renal cell carcinoma [ 14 ]

Location

Body (cg20915212)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.02E+00 Statistic Test p-value:4.44E-02; Z-score:8.25E-01

Methylation in Case

8.11E-01 (Median) Methylation in Control 7.97E-01 (Median)

Studied Phenotype

Renal cell carcinoma[ ICD-11:2C90]

Experimental Material

Patient tissue samples

  Depression

           3 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon1

Methylation of ABCA3 in depression [ 15 ]

Location

Body (cg05824333)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:1.00E+00 Statistic Test p-value:1.80E-02; Z-score:4.32E-02

Methylation in Case

9.52E-01 (Median) Methylation in Control 9.52E-01 (Median)

Studied Phenotype

Depression[ ICD-11:6A8Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon2

Methylation of ABCA3 in depression [ 15 ]

Location

Body (cg04058100)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.01E+00 Statistic Test p-value:4.13E-02; Z-score:-4.57E-01

Methylation in Case

8.58E-01 (Median) Methylation in Control 8.66E-01 (Median)

Studied Phenotype

Depression[ ICD-11:6A8Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon3

Methylation of ABCA3 in depression [ 15 ]

Location

Body (cg04149930)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change:-1.01E+00 Statistic Test p-value:4.34E-02; Z-score:-2.58E-01

Methylation in Case

6.77E-01 (Median) Methylation in Control 6.84E-01 (Median)

Studied Phenotype

Depression[ ICD-11:6A8Z]

Experimental Material

Patient tissue samples

microRNA

  Unclear Phenotype

           5 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon1

miR-20a directly targets ABCA3 [ 16 ]

Epigenetic Type

microRNA Experiment Method CLASH

miRNA Stemloop ID

miR-20a miRNA Mature ID miR-20a-5p

miRNA Sequence

UAAAGUGCUUAUAGUGCAGGUAG

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon2

miR-335 directly targets ABCA3 [ 17 ]

Epigenetic Type

microRNA Experiment Method Microarray

miRNA Stemloop ID

miR-335 miRNA Mature ID miR-335-5p

miRNA Sequence

UCAAGAGCAAUAACGAAAAAUGU

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon3

miR-409 directly targets ABCA3 [ 18 ]

Epigenetic Type

microRNA Experiment Method HITS-CLIP

miRNA Stemloop ID

miR-409 miRNA Mature ID miR-409-5p

miRNA Sequence

AGGUUACCCGAGCAACUUUGCAU

miRNA Target Type

Direct

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon4

miR-92a directly targets ABCA3 [ 16 ]

Epigenetic Type

microRNA Experiment Method CLASH

miRNA Stemloop ID

miR-92a miRNA Mature ID miR-92a-3p

miRNA Sequence

UAUUGCACUUGUCCCGGCCUGU

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon5

miR-92b directly targets ABCA3 [ 16 ]

Epigenetic Type

microRNA Experiment Method CLASH

miRNA Stemloop ID

miR-92b miRNA Mature ID miR-92b-3p

miRNA Sequence

UAUUGCACUCGUCCCGGCCUCC

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)
References
1 Atypical Teratoid/Rhabdoid Tumors Are Comprised of Three Epigenetic Subgroups with Distinct Enhancer Landscapes. Cancer Cell. 2016 Mar 14;29(3):379-393.
2 DNA Methylation Dynamics in Urological Tumors.
3 Genome-wide Scan for Methylation Profiles in Breast Cancer
4 Genome-scale analysis of DNA methylation in colorectal cancer using Infinium HumanMethylation450 BeadChips. Epigenetics. 2013 Sep;8(9):921-34.
5 Differences in DNA methylation signatures reveal multiple pathways of progression from adenoma to colorectal cancer. Gastroenterology. 2014 Aug;147(2):418-29.e8.
6 Exploring genome-wide DNA methylation profiles altered in hepatocellular carcinoma using Infinium HumanMethylation 450 BeadChips. Epigenetics. 2013 Jan;8(1):34-43.
7 HIV-1 Infection Accelerates Age According to the Epigenetic Clock. J Infect Dis. 2015 Nov 15;212(10):1563-73.
8 DNA methylation analysis of lung adenocarcinoma and adjacent non-tumor tissues
9 DNA Methylation signatures in panic disorder. Transl Psychiatry. 2017 Dec 18;7(12):1287.
10 Prognostic Classifier Based on Genome-Wide DNA Methylation Profiling in Well-Differentiated Thyroid Tumors. J Clin Endocrinol Metab. 2017 Nov 1;102(11):4089-4099.
11 Genome-wide DNA methylation analysis of systemic lupus erythematosus reveals persistent hypomethylation of interferon genes and compositional changes to CD4+ T-cell populations. PLoS Genet. 2013;9(8):e1003678.
12 Genome-wide DNA methylation patterns in pancreatic ductal adenocarcinoma reveal epigenetic deregulation of SLIT-ROBO, ITGA2 and MET signaling. Int J Cancer. 2014 Sep 1;135(5):1110-8.
13 Reducing the risk of false discovery enabling identification of biologically significant genome-wide methylation status using the HumanMethylation450 array. BMC Genomics. 2014 Jan 22;15:51.
14 A CpG-methylation-based assay to predict survival in clear cell renal cell carcinoma. Nat Commun. 2015 Oct 30;6:8699.
15 DNA methylation and inflammation marker profiles associated with a history of depression. Hum Mol Genet. 2018 Aug 15;27(16):2840-2850.
16 Mapping the human miRNA interactome by CLASH reveals frequent noncanonical binding. Cell. 2013 Apr 25;153(3):654-65.
17 Endogenous human microRNAs that suppress breast cancer metastasis. Nature. 2008 Jan 10;451(7175):147-52.
18 Epigenetic regulation of the DLK1-MEG3 microRNA cluster in human type 2 diabetic islets. Cell Metab. 2014 Jan 7;19(1):135-45.

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