Detail Information of DT Wildtype Structure
| General Information of Drug Transporter (DT) | ||||||
|---|---|---|---|---|---|---|
| DT ID | DTD0095 Transporter Info | |||||
| Gene Name | SLC13A5 | |||||
| Transporter Name | Sodium-coupled citrate transporter | |||||
| Gene ID | ||||||
| UniProt ID | ||||||
| Modelled Structures of This DT | ||||||
| Click to Save PDB File in TXT Format | ||||||
| Detail Information of Structural Model | ||||||
| Method | Homology modeling | |||||
| Template PDB | 3REF_A; 3W8R_A; 5ULD_A | Identity | 59.091; 36.364; 32.80% | |||
| Ramachandran Plot |
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| Click to Save Ramachandran Plot in PNG Format | ||||||
| Ramz Z Score | -1.81 ±0.34 | |||||
| Residues in Favored Region | 459 | Ramachandran favored | 94.06% | |||
| Number of Outliers | 7 | Ramachandran outliers | 1.43% | |||
| Local Quality |
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| Click to Save Local Quality Plot in PNG Format | ||||||
| QMEANBrane Score | 0.75 | |||||
| AlphaFold Protein Structure Database | ||||||
| SWISS-MODEL Database | ||||||
| Experimental Structures of This DT | ||||||
| PDB ID | Scanning Method | Resolution | Expression System | Details | Ref | |
| 7JSJ | EM | 3.12 Å | Trichoplusia Ni | [1] | ||
| Structure | ||||||
| Click to Save PDB File in TXT Format | ||||||
| Corresponding chain | A/B | |||||
| Sequence Length | 568 | Mutation | No | |||
| 7JSK | EM | 3.04 Å | Trichoplusia Ni | [1] | ||
| Structure | ||||||
| Click to Save PDB File in TXT Format | ||||||
| Corresponding chain | A/B | |||||
| Sequence Length | 568 | Mutation | No | |||
| 8UVB | EM | 2.13 Å | Trichoplusia Ni | [2] | ||
| Structure | ||||||
| Click to Save PDB File in TXT Format | ||||||
| Corresponding chain | A/B | |||||
| Sequence Length | 568 | Mutation | No | |||
| 8UVH | EM | 2.33 Å | Trichoplusia Ni | [2] | ||
| Structure | ||||||
| Click to Save PDB File in TXT Format | ||||||
| Corresponding chain | A/B | |||||
| Sequence Length | 568 | Mutation | No | |||
| References | ||||||
| 1 | Structure and inhibition mechanism of the human citrate transporter NaCT. Nature. 2021;591(7848):157-161. | |||||
| 2 | Substrate translocation and inhibition in human dicarboxylate transporter NaDC3. Nat Struct Mol Biol. 2025 Mar;32(3):502-512. | |||||
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