Modelled Stucture
Method:Homology modeling
Teplate PDB:6C08_C
Identity:66.32%
Minimized Score:-385.896
Detail: Structure Info
Detail Information of Inter-species Structural Difference
| General Information of Drug Transporter (DT) | |||||
|---|---|---|---|---|---|
| DT ID | DTD0336 Transporter Info | ||||
| Gene Name | SLC38A9 | ||||
| Protein Name | Sodium-coupled neutral amino acid transporter 9 | ||||
| Gene ID | |||||
| UniProt ID | |||||
| 3D Structure |
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| Inter-species Structural Differences (ISD) | |||||
| Mus musculus (Mouse) | |||||
| Gene Name | Slc38a9 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method:Homology modeling Teplate PDB:7KGV_A Sequence Length:557 Identity:62.903% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -1094.167 kcal/mol | |||
| Ramachandra Favored | Medium |
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| QMEANBrane Quality | Medium |
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| Ramachandran Plot |
Ramz Z Score:-1.39 ±0.34 Residues in Favored Region:528 Ramachandran favored:95.14% Number of Outliers:7 Ramachandran outliers:1.26% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score:0.74 |
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| Click to Save Local Quality Plot in PNG Format | |||||
| Rattus norvegicus (Rat) | |||||
| Gene Name | Slc38a9 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method:Homology modeling Teplate PDB:7KGV_A Sequence Length:556 Identity:62.724% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -1105.451 kcal/mol | |||
| Ramachandra Favored | Medium |
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| QMEANBrane Quality | Medium |
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| Ramachandran Plot |
Ramz Z Score:-1.18 ±0.34 Residues in Favored Region:531 Ramachandran favored:95.85% Number of Outliers:5 Ramachandran outliers:0.90% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score:0.74 |
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| Click to Save Local Quality Plot in PNG Format | |||||
| Danio rerio (Zebrafish) | |||||
| Gene Name | slc38a9 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method:Homology modeling Teplate PDB:7KGV_A Sequence Length:549 Identity:99.271% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -1135.247 kcal/mol | |||
| Ramachandra Favored | Poor |
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| QMEANBrane Quality | Medium |
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| Ramachandran Plot |
Ramz Z Score:-1.4 ±0.34 Residues in Favored Region:519 Ramachandran favored:94.88% Number of Outliers:5 Ramachandran outliers:0.91% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score:0.74 |
||||
| Click to Save Local Quality Plot in PNG Format | |||||
| References | |||||
| 1 | A conformational change in the N terminus of SLC38A9 signals mTORC1 activation. Structure. 2021;29(5):426-432.e8. | ||||
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