Modelled Stucture
Method:Homology modeling
Teplate PDB:5U1D_B
Identity:41.417%
Minimized Score:-1523.077
Detail: Structure Info
Detail Information of Inter-species Structural Difference
| General Information of Drug Transporter (DT) | |||||
|---|---|---|---|---|---|
| DT ID | DTD0055 Transporter Info | ||||
| Gene Name | ABCB9 | ||||
| Protein Name | TAP-like protein | ||||
| Gene ID | |||||
| UniProt ID | |||||
| 3D Structure |
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| Inter-species Structural Differences (ISD) | |||||
| Mus musculus (Mouse) | |||||
| Gene Name | Abcb9 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method:Homology modeling Teplate PDB:5U1D_A Sequence Length:580 Identity:42.539% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -1497.86 kcal/mol | |||
| Ramachandra Favored | Medium |
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| QMEANBrane Quality | High |
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| Ramachandran Plot |
Ramz Z Score:-0.09 ±0.32 Residues in Favored Region:563 Ramachandran favored:97.40% Number of Outliers:1 Ramachandran outliers:0.17% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score:0.8 |
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| Click to Save Local Quality Plot in PNG Format | |||||
| Rattus norvegicus (Rat) | |||||
| Gene Name | Abcb9 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method:Homology modeling Teplate PDB:5U1D_A Sequence Length:580 Identity:42.367% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -1513.364 kcal/mol | |||
| Ramachandra Favored | Medium |
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| QMEANBrane Quality | High |
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| Ramachandran Plot |
Ramz Z Score:-0.46 ±0.31 Residues in Favored Region:566 Ramachandran favored:97.92% Number of Outliers:1 Ramachandran outliers:0.17% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score:0.8 |
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| Click to Save Local Quality Plot in PNG Format | |||||
| References | |||||
| 1 | The lysosomal transporter TAPL has a dual role as peptide translocator and phosphatidylserine floppase. Nat Commun. 2022;13(1):5851. | ||||
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