Detail Information of Genetic Polymorphisms
General Information of Drug Transporter (DT) | |||||
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DT ID | DTD0530 Transporter Info | ||||
Gene Name | CACNA1H | ||||
Protein Name | Voltage-gated calcium channel alpha Cav3.2 | ||||
Gene ID | |||||
UniProt ID | |||||
Genetic Polymorphisms of DT (GPD) | |||||
Genetic Polymorphism | rs1054645 | ||||
Site of GPD | chr16:1220162 (GRCh38.p12) | ||||
GPD Type | SNP | ||||
Allele(s) in dbSNP | G>A | ||||
Minor Allele Frequency | G=0.2993/1499 (Global) | ||||
Allele A | Click to Show/Hide the Full List of Affected Drugs: 2 Drugs in Total | ||||
Antiepileptics | N.A. | Myotonic Disorders | Allele A is not associated with resistance to antiepileptics in people with Epilepsy as compared to allele G. | [ 1] | |
Antiepileptics | N.A. | Epilepsy | Irrelevant to the drug resistance in patients (compare with allele G) | [ 1] | |
Genetic Polymorphism | rs3751664 | ||||
Site of GPD | chr16:1204369 (GRCh38.p12) | ||||
GPD Type | SNP | ||||
Allele(s) in dbSNP | C>T | ||||
Minor Allele Frequency | C=0.9550/1889 (Global) | ||||
Allele T | Click to Show/Hide the Full List of Affected Drugs: 1 Drugs in Total | ||||
Valproic Acid | N.A. | Myotonic Disorders | Allele T is associated with increased resistance to valproic acid in people with Epilepsy as compared to allele C. | [ 2] | |
Allele C | Click to Show/Hide the Full List of Affected Drugs: 1 Drugs in Total | ||||
Antiepileptics | N.A. | Myotonic Disorders | Allele C is not associated with resistance to antiepileptics in people with Epilepsy as compared to allele T. | [ 1] | |
Genetic Polymorphism | rs61734410 | ||||
Site of GPD | chr16:1202369 (GRCh38.p12) | ||||
GPD Type | SNP | ||||
Allele(s) in dbSNP | C>A / C>T | ||||
Minor Allele Frequency | C=0.5730/1133 (Global) | ||||
Allele T | Click to Show/Hide the Full List of Affected Drugs: 1 Drugs in Total | ||||
Ethosuximide | N.A. | Myotonic Disorders | Allele T is associated with decreased clinical benefit to ethosuximide in children with Epilepsy as compared to allele C. | [ 3] | |
Genetic Polymorphism | rs2753326 | ||||
Site of GPD | chr16:1211219 (GRCh38.p12) | ||||
GPD Type | SNP | ||||
Allele(s) in dbSNP | A>G | ||||
Minor Allele Frequency | A=0.2920/577 (Global) | ||||
Allele A | Click to Show/Hide the Full List of Affected Drugs: 1 Drugs in Total | ||||
Lamotrigine | N.A. | Myotonic Disorders | Allele A is associated with increased clinical benefit to lamotrigine in children with Epilepsy as compared to allele G. | [ 3] | |
Genetic Polymorphism | rs11640796 | ||||
Site of GPD | chr16:1175628 (GRCh38.p12) | ||||
GPD Type | SNP | ||||
Allele(s) in dbSNP | A>G | ||||
Minor Allele Frequency | A=0.7630/1509 (Global) | ||||
Allele A | Click to Show/Hide the Full List of Affected Drugs: 1 Drugs in Total | ||||
Antiepileptics | N.A. | Myotonic Disorders | Allele A is not associated with resistance to antiepileptics in people with Epilepsy as compared to allele G. | [ 1] | |
Genetic Polymorphism | rs7191246 | ||||
Site of GPD | chr16:1202737 (GRCh38.p12) | ||||
GPD Type | SNP | ||||
Allele(s) in dbSNP | G>C | ||||
Minor Allele Frequency | G=0.8250/1632 (Global) | ||||
Allele C | Click to Show/Hide the Full List of Affected Drugs: 1 Drugs in Total | ||||
Antiepileptics | N.A. | Myotonic Disorders | Allele C is not associated with resistance to antiepileptics in people with Epilepsy as compared to allele G. | [ 1] | |
Genetic Polymorphism | rs3794619 | ||||
Site of GPD | chr16:1197482 (GRCh38.p12) | ||||
GPD Type | SNP | ||||
Allele(s) in dbSNP | T>C | ||||
Minor Allele Frequency | T=0.8250/1632 (Global) | ||||
Allele T | Click to Show/Hide the Full List of Affected Drugs: 1 Drugs in Total | ||||
Antiepileptics | N.A. | Myotonic Disorders | Allele T is not associated with resistance to antiepileptics in people with Epilepsy as compared to allele C. | [ 1] | |
Genetic Polymorphism | rs2753325 | ||||
Site of GPD | chr16:1211222 (GRCh38.p12) | ||||
GPD Type | SNP | ||||
Allele(s) in dbSNP | A>C / A>G | ||||
Minor Allele Frequency | A=0.2910/575 (Global) | ||||
Allele A | Click to Show/Hide the Full List of Affected Drugs: 1 Drugs in Total | ||||
Lamotrigine | N.A. | Myotonic Disorders | Allele A is associated with increased clinical benefit to lamotrigine in children with Epilepsy as compared to allele G. | [ 3] | |
References | |||||
1 | Association study between polymorphisms in the CACNA1A, CACNA1C, and CACNA1H genes and drug-resistant epilepsy in the Chinese Han population. Seizure. 2015 Aug;30:64-9. | ||||
2 | Association of valproic acid-related pharmacodynamics, pharmacokinetic pathways and transporter gene polymorphisms and antiepileptic efficacy in Chinese patients. Xenobiotica. 2025 Jun 23:1-12. | ||||
3 | Pharmacogenetics of antiepileptic drug efficacy in childhood absence epilepsy. Ann Neurol. 2017 Mar;81(3):444-453. |
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