TransporterID Transporter Name type Epigenetic Phenomenon Epigenetic Phenomenon_o Order ERVID miRNA Stemloop ID miRNA Mature ID Sequence Variations Type Disease Variations Type Variations_Type_ Disease ICD11 Disease_ Tissue_ Tissue Variations Location miRNA target type Histones location Variations Frequency Description Discover Experiment Experimental Material Alteration Trend Detect Experiment Gene Case Median Gene Control Median Fold Change Z-Score P-value ReferenceID Fold_change_adj Z-score_adj P-value_adj Fold_change_other Z-score_other P-value_other order1 order2 order3 Figure_name DTD0001 ABCC1 1 Hypoacetylation of ABCC1 in Breast cancer Hypoacetylation of ABCC1 in Breast cancer ag EP38512 . . . Histone acetylation Breast cancer Histone acetylation Histone_acetylation Breast cancer 2C60 Breast_cancer tissue tissue Promoter . . . MRP1 overexpression in SN38-resistant T47D cells associated with the suppression of epigenetic gene silencing via DNA hypermethylation and histone deacetylation. . T47D/SN120 and T47D/SN150 breast cancer sublines Up RT-qPCR and Western blot . . . . . ref13330 . . . . . . . . . . DTD0002 ABCC2 1 Hypoacetylation of ABCC1 in Breast cancer Hypoacetylation of ABCC1 in Breast cancer ag EP38512 . . . Histone acetylation Breast cancer Histone acetylation Histone_acetylation Breast cancer 2C60 Breast_cancer tissue tissue Promoter . . . MRP2 overexpression in SN38-resistant T47D cells associated with the suppression of epigenetic gene silencing via DNA hypermethylation and histone deacetylation. . T47D/SN120 and T47D/SN150 breast cancer sublines Up RT-qPCR and Western blot . . . . . ref13330 . . . . . . . . . . DTD0012 ABCC3 1 Hypoacetylation of ABCC1 in Breast cancer Hypoacetylation of ABCC1 in Breast cancer ag EP38512 . . . Histone acetylation Breast cancer Histone acetylation Histone_acetylation Breast cancer 2C60 Breast_cancer tissue tissue Promoter . . . MRP3 overexpression in SN38-resistant T47D cells associated with the suppression of epigenetic gene silencing via DNA hypermethylation and histone deacetylation. . T47D/SN120 and T47D/SN150 breast cancer sublines Up RT-qPCR and Western blot . . . . . ref13330 . . . . . . . . . . DTD0015 ABCC4 1 Hypoacetylation of ABCC1 in Breast cancer Hypoacetylation of ABCC1 in Breast cancer ag EP38512 . . . Histone acetylation Breast cancer Histone acetylation Histone_acetylation Breast cancer 2C60 Breast_cancer tissue tissue Promoter . . . MRP4 overexpression in SN38-resistant T47D cells associated with the suppression of epigenetic gene silencing via DNA hypermethylation and histone deacetylation. . T47D/SN120 and T47D/SN150 breast cancer sublines Up RT-qPCR and Western blot . . . . . ref13330 . . . . . . . . . . DTD0005 SLC22A7 1 Hypoacetylation of SLC22A7 in Hepatocellular carcinoma Hypoacetylation of SLC22A7 in Hepatocellular carcinoma ag EP38513 . . . Histone acetylation Hepatocellular carcinoma Histone acetylation Histone_acetylation Hepatocellular carcinoma 2C12 Hepatocellular_carcinoma tissue tissue Promoter . H3K18;H4K16 . "Abnormal enrichment of sirtuin 7 (SIRT7), histone deacetylase 7 (HDAC7) and lysine acetyltransferase 8 (KAT8) at the promoter of OAT2 caused histone hypoacetylation and OAT2 downregulation." . SMMC-7721 HCC cells Down RT-qPCR . . . . . ref13331 . . . . . . . . . . DTD0019 SLC10A1 1 Loss of H3K27ac in SLC10A1 in Hepatocellular carcinoma Loss of H3K27ac in SLC10A1 in Hepatocellular carcinoma ag EP38516 . . . Histone acetylation Hepatocellular carcinoma Histone acetylation Histone_acetylation Hepatocellular carcinoma 2C12 Hepatocellular_carcinoma tissue tissue Promoter . H3K27 . "hNTCP expression is downregulated in HCC due to loss of activating histone mark H3K27ac at the transcription start site. HDAC inhibitor treatment restores H3K27ac levels and GR binding, reactivating hNTCP expression and making cells susceptible to HBV infection." . "HepG2 cells, primary human hepatocytes, HCC tissues" Down RT-qPCR . . . . . ref13333 . . . . . . . . . . DTD0003 ABCB1 1 Hypoacetylation of ABCB1 in SCLC (compare with etoposide-resistant counterpart cells) Hypoacetylation of ABCB1 in SCLC (compare with etoposide-resistant counterpart cells) adb EP10594 . . . Histone acetylation Small cell lung cancer Histone acetylation Histone_acetylation Small cell lung cancer 2C25.1 Small_cell_lung_cancer tissue tissue Distal promoter (-981 to -817) . H4 . High acetylation level of histone H3 of ABCB1 in etoposide-resistant small cell lung carcinoma associated with higher ABCB1 expression. Chromatin immunoprecipitation Human small cell lung carcinoma cell line (H69) Down RT-qPCR . . . . . ref1649 . . . . . . . . . . DTD0003 ABCB1 1 Hypoacetylation of ABCB1 in SCLC (compare with etoposide-resistant counterpart cells) Hypoacetylation of ABCB1 in SCLC (compare with etoposide-resistant counterpart cells) adb EP10594 . . . Histone acetylation Small cell lung cancer Histone acetylation Histone_acetylation Small cell lung cancer 2C25.1 Small_cell_lung_cancer tissue tissue Promoter (-981 to -817 and -222 to +37) . H3 . "TSA induces downregulation of ABCB1 expression in drug-resistant SCLC cell line, independently of promoter methylation, and MBD1 or PCAF recruitment." Chromatin immunoprecipitation Multiple cell lines of human Down RT-qPCR . . . . . ref1649 . . . . . . . . . . DTD0003 ABCB1 1 Hypoacetylation of ABCB1 in SCLC (compare with etoposide-resistant counterpart cells) Hypoacetylation of ABCB1 in SCLC (compare with etoposide-resistant counterpart cells) adb EP10594 . . . Histone acetylation Small cell lung cancer Histone acetylation Histone_acetylation Small cell lung cancer 2C25.1 Small_cell_lung_cancer tissue tissue Promoter (-981 to -817 and -222 to +37) . H4 . "TSA induces downregulation of ABCB1 expression in drug-resistant SCLC cell line, independently of promoter methylation, and MBD1 or PCAF recruitment." Chromatin immunoprecipitation Multiple cell lines of human Down RT-qPCR . . . . . ref1649 . . . . . . . . . . DTD0003 ABCB1 1 Hypoacetylation of ABCB1 in SCLC (compare with etoposide-resistant counterpart cells) Hypoacetylation of ABCB1 in SCLC (compare with etoposide-resistant counterpart cells) adb EP10594 . . . Histone acetylation Small cell lung cancer Histone acetylation Histone_acetylation Small cell lung cancer 2C25.1 Small_cell_lung_cancer tissue tissue Proximal promoter (+292 to +591) . H3 . High acetylation level of histone H3 of ABCB1 in etoposide-resistant small cell lung carcinoma associated with higher ABCB1 expression. Chromatin immunoprecipitation Human small cell lung carcinoma cell line (H69) Down RT-qPCR . . . . . ref1649 . . . . . . . . . . DTD0003 ABCB1 1 Hypoacetylation of ABCB1 in SCLC (compare with etoposide-resistant counterpart cells) Hypoacetylation of ABCB1 in SCLC (compare with etoposide-resistant counterpart cells) adb EP10594 . . . Histone acetylation Small cell lung cancer Histone acetylation Histone_acetylation Small cell lung cancer 2C25.1 Small_cell_lung_cancer tissue tissue Proximal promoter (+292 to +591) . H4 . High acetylation level of histone H4 of ABCB1 in etoposide-resistant small cell lung carcinoma associated with higher ABCB1 expression. Chromatin immunoprecipitation Human small cell lung carcinoma cell line (H69) Down RT-qPCR . . . . . ref1649 . . . . . . . . . . DTD0003 ABCB1 1 Hypoacetylation of ABCB1 in sarcoma (compare with multidrug-resistant counterpart cells) Hypoacetylation of ABCB1 in sarcoma (compare with multidrug-resistant counterpart cells) adb EP10595 . . . Histone acetylation Sarcoma Histone acetylation Histone_acetylation Sarcoma 2A60.39 Sarcoma tissue tissue 968 bp upstream of exon 1 . H3 . The chromatin structure of the ABCB1 upstream promoter is changed via acetylation of histone H3 initiating ABCB1 activation. Chromatin immunoprecipitation Multiple cell lines of human Down RT-qPCR . . . . . ref1652 . . . . . . . . . . DTD0003 ABCB1 1 Hypoacetylation of ABCB1 in promyeloblastic leukemia (compare with valproate-treatment counterpart AML cells) Hypoacetylation of ABCB1 in promyeloblastic leukemia (compare with valproate-treatment counterpart AML cells) adf EP10596 . . . Histone acetylation Promyeloblastic leukemia Histone acetylation Histone_acetylation Promyeloblastic leukemia 2A60.0 Promyeloblastic_leukemia tissue tissue . . . . Exposure of promyeloblastic leukemia cells for 24 h to 2 mM of the weak histone deacetylase inhibitor phenylbutyrate resulted in enhanced and marked expression of P-glycoprotein. Chromatin immunoprecipitation Human leukemia stem cell-like cell line (KG-1a) Down RT-qPCR . . . . . ref3436 . . . . . . . . . . DTD0003 ABCB1 1 Hypoacetylation of ABCB1 in lymphoid tumour (compare with etoposide-resistant counterpart cells) Hypoacetylation of ABCB1 in lymphoid tumour (compare with etoposide-resistant counterpart cells) adb EP10597 . . . Histone acetylation Lymphoma Histone acetylation Histone_acetylation Lymphoma 2B30 Lymphoma tissue tissue Exon 1 . H3 . Histone H3 acetylation in the same CpG island was significantly increased in drug-resistant cell line. Chromatin immunoprecipitation Multiple cell lines of human Down RT-qPCR . . . . . ref1650 . . . . . . . . . . DTD0003 ABCB1 1 Hypoacetylation of ABCB1 in breast cancer (compare with doxorubicin-resistant counterpart cells) Hypoacetylation of ABCB1 in breast cancer (compare with doxorubicin-resistant counterpart cells) adb EP10598 . . . Histone acetylation Breast cancer Histone acetylation Histone_acetylation Breast cancer 2C60-2C6Z Breast_cancer tissue tissue Promoter . H3K9 . Elevated level of lysine 9-acetylated histone H3 at the MDR1 promoter in doxorubicinresistant MCF-7 cells. Chromatin immunoprecipitation Multiple cell lines of human Down RT-qPCR . . . . . ref1648 . . . . . . . . . . DTD0003 ABCB1 1 Hypoacetylation of ABCB1 in AML (compare with valproate treatment counterpart cells) Hypoacetylation of ABCB1 in AML (compare with valproate treatment counterpart cells) adb EP10599 . . . Histone acetylation Acute myeloid leukemia Histone acetylation Histone_acetylation Acute myeloid leukemia 2A60 Acute_myeloid_leukemia tissue tissue Promoter . H3 . Hyperacetylation of histone proteins in the promoter regions of MDR1 on valproate treatment. Chromatin immunoprecipitation Multiple cell lines of human Down Western Blot . . . . . ref1651 . . . . . . . . . . DTD0003 ABCB1 1 Hypoacetylation of ABCB1 in acute myeloid leukemia (compare with valproate-treatment counterpart AML cells) Hypoacetylation of ABCB1 in acute myeloid leukemia (compare with valproate-treatment counterpart AML cells) adb EP10600 . . . Histone acetylation Acute myeloid leukemia Histone acetylation Histone_acetylation Acute myeloid leukemia 2A60 Acute_myeloid_leukemia tissue tissue Promoter . . . Chromatin immunoprecipitation revealed the hyperacetylation of histone proteins in the promoter regions of MDR1 on valproate treatment. Chromatin immunoprecipitation Multiple cell lines of human Down RT-qPCR . . . . . ref1651 . . . . . . . . . . DTD0014 Abcb11 1 Hyperacetylation of Abcb11 in liver (compare with kidney and cerebrum cells) Hyperacetylation of Abcb11 in liver (compare with kidney and cerebrum cells) ad EP10315 . . . Histone acetylation Rat liver Histone acetylation Histone_acetylation Rat liver . Rat_liver tissue tissue Promoter . H3 . The histone H3 associated with Oatp1b2 promoters was hyperacetylated in the liver but was acetylated very little in the kidney and cerebrum. Chromatin immunoprecipitation Model organism in vivo (mouse) Up RT-qPCR . . . . . ref3435 . . . . . . . . . . DTD0013 ABCB4 1 Hypoacetylation of ABCB4 in breast cancer (compare with doxorubicin-resistant counterpart cells) Hypoacetylation of ABCB4 in breast cancer (compare with doxorubicin-resistant counterpart cells) adb EP10317 . . . Histone acetylation Breast cancer Histone acetylation Histone_acetylation Breast cancer 2C60-2C6Z Breast_cancer tissue tissue Promoter . H3 . "ABCB4 was overexpressed in doxorubicin-resistant breast cancer cells compared to their doxorubicin-sensitive counterparts, which was associated with reduced DNA methylation as well as increased histone acetylation at the ABCB4 promoter." Chromatin immunoprecipitation Multiple cell lines of human Down RT-qPCR . . . . . ref3467 . . . . . . . . . . DTD0013 ABCB4 1 Hypoacetylation of ABCB4 in breast cancer (compare with doxorubicin-resistant counterpart cells) Hypoacetylation of ABCB4 in breast cancer (compare with doxorubicin-resistant counterpart cells) adb EP10317 . . . Histone acetylation Breast cancer Histone acetylation Histone_acetylation Breast cancer 2C60-2C6Z Breast_cancer tissue tissue Promoter . H4 . "ABCB4 was overexpressed in doxorubicin-resistant breast cancer cells compared to their doxorubicin-sensitive counterparts, which was associated with reduced DNA methylation as well as increased histone acetylation at the ABCB4 promoter." Chromatin immunoprecipitation Multiple cell lines of human Down RT-qPCR . . . . . ref3467 . . . . . . . . . . DTD0057 ABCC11 1 Hypoacetylation of ABCB11 in acute myeloid leukemia (compare with valproate treatment counterpart cells) Hypoacetylation of ABCB11 in acute myeloid leukemia (compare with valproate treatment counterpart cells) ad EP09533 . . . Histone acetylation Acute myeloid leukemia Histone acetylation Histone_acetylation Acute myeloid leukemia 2A60 Acute_myeloid_leukemia tissue tissue Promoter . H3;H3K9 . "Chromatin immunoprecipitation revealed the hyperacetylation of histone proteins in the promoter regions of MDR1, BCRP, and MRP8 on valproate treatment." Chromatin immunoprecipitation Multiple cell lines of human Up RT-qPCR . . . . . ref1651 . . . . . . . . . . DTD0057 ABCC11 1 Hypoacetylation of ABCB11 in acute myeloid leukemia (compare with valproate treatment counterpart cells) Hypoacetylation of ABCB11 in acute myeloid leukemia (compare with valproate treatment counterpart cells) ad EP09533 . . . Histone acetylation Acute myeloid leukemia Histone acetylation Histone_acetylation Acute myeloid leukemia 2A60 Acute_myeloid_leukemia tissue tissue Promoter . H4 . "Chromatin immunoprecipitation revealed the hyperacetylation of histone proteins in the promoter regions of MDR1, BCRP, and MRP8 on valproate treatment." Chromatin immunoprecipitation Multiple cell lines of human Up RT-qPCR . . . . . ref1651 . . . . . . . . . . DTD0061 ABCC8 1 Hypoacetylation of ABCC8 in acute myeloid leukemia (compare with valproate-treatment counterpart AML cells) Hypoacetylation of ABCC8 in acute myeloid leukemia (compare with valproate-treatment counterpart AML cells) adb EP09531 . . . Histone acetylation Acute myeloid leukemia Histone acetylation Histone_acetylation Acute myeloid leukemia 2A60 Acute_myeloid_leukemia tissue tissue Promoter . . . Chromatin immunoprecipitation revealed the hyperacetylation of histone proteins in the promoter regions of MRP8 on valproate treatment. Chromatin immunoprecipitation Multiple cell lines of human Down RT-qPCR . . . . . ref1651 . . . . . . . . . . DTD0061 ABCC8 1 Hypoacetylation of ABCC8 in acute myeloid leukemia (compare with valproate-treatment counterpart AML cells) Hypoacetylation of ABCC8 in acute myeloid leukemia (compare with valproate-treatment counterpart AML cells) adf EP09531 . . . Histone acetylation Promyeloblastic leukemia Histone acetylation Histone_acetylation Promyeloblastic leukemia 2A60.0 Promyeloblastic_leukemia tissue tissue . . . . Exposure of promyeloblastic leukemia cells for 24 h to 2 mM of the weak histone deacetylase inhibitor phenylbutyrate resulted in enhanced and marked expression of MRP8. Chromatin immunoprecipitation Human leukemia stem cell-like cell line (KG-1a) Down RT-qPCR . . . . . ref3436 . . . . . . . . . . DTD0004 ABCG2 1 Hypoacetylation of ABCG2 in colon cancer (compare with romidepsin-resistant counterpart cells) Hypoacetylation of ABCG2 in colon cancer (compare with romidepsin-resistant counterpart cells) adb EP10544 . . . Histone acetylation Colon cancer Histone acetylation Histone_acetylation Colon cancer 2B90 Colon_cancer tissue tissue Promoter . H3 . High acetylation level of histone H3 of ABCG2 in romidepsin-resistant colon cancer cells associated with higher ABCG2 expression. Chromatin immunoprecipitation Multiple cell lines of human Down RT-qPCR . . . . . ref1702 . . . . . . . . . . DTD0004 ABCG2 1 Hypoacetylation of ABCG2 in breast cancer (compare with doxorubicin-resistant counterpart cells) Hypoacetylation of ABCG2 in breast cancer (compare with doxorubicin-resistant counterpart cells) adb EP10545 . . . Histone acetylation Breast cancer Histone acetylation Histone_acetylation Breast cancer 2C60-2C6Z Breast_cancer tissue tissue Promoter . H3 . High acetylation level of histone H3 of ABCG2 in doxorubicin-resistant breast cancer cells associated with higher ABCG2 expression. Chromatin immunoprecipitation Multiple cell lines of human Down RT-qPCR . . . . . ref1703 . . . . . . . . . . DTD0004 ABCG2 1 Hypoacetylation of ABCG2 in AML (compare with valproate treatment counterpart cells) Hypoacetylation of ABCG2 in AML (compare with valproate treatment counterpart cells) adb EP10546 . . . Histone acetylation Acute myeloid leukemia Histone acetylation Histone_acetylation Acute myeloid leukemia 2A60 Acute_myeloid_leukemia tissue tissue Promoter . H3K9 . Hyperacetylation of histone proteins in the promoter regions of BCRP on valproate treatment. Chromatin immunoprecipitation Multiple cell lines of human Down Western Blot . . . . . ref1651 . . . . . . . . . . DTD0004 ABCG2 1 Hypoacetylation of ABCG2 in AML (compare with valproate treatment counterpart cells) Hypoacetylation of ABCG2 in AML (compare with valproate treatment counterpart cells) adb EP10546 . . . Histone acetylation Acute myeloid leukemia Histone acetylation Histone_acetylation Acute myeloid leukemia 2A60 Acute_myeloid_leukemia tissue tissue Promoter . H4 . Hyperacetylation of histone proteins in the promoter regions of BCRP on valproate treatment. Chromatin immunoprecipitation Multiple cell lines of human Down Western Blot . . . . . ref1651 . . . . . . . . . . DTD0004 ABCG2 1 Hypoacetylation of ABCG2 in acute myeloid leukemia (compare with valproate-treatment counterpart AML cells) Hypoacetylation of ABCG2 in acute myeloid leukemia (compare with valproate-treatment counterpart AML cells) adb EP10547 . . . Histone acetylation Acute myeloid leukemia Histone acetylation Histone_acetylation Acute myeloid leukemia 2A60 Acute_myeloid_leukemia tissue tissue Promoter . . . Chromatin immunoprecipitation revealed the?hyperacetylation?of?histone?proteins in the promoter regions of?BCRP on valproate treatment. Chromatin immunoprecipitation Multiple cell lines of human Down RT-qPCR . . . . . ref1651 . . . . . . . . . . DTD0004 ABCG2 1 Hypoacetylation of ABCG2 in acute myeloid leukemia (compare with valproate-treatment counterpart AML cells) Hypoacetylation of ABCG2 in acute myeloid leukemia (compare with valproate-treatment counterpart AML cells) adf EP10547 . . . Histone acetylation Promyeloblastic leukemia Histone acetylation Histone_acetylation Promyeloblastic leukemia 2A60.0 Promyeloblastic_leukemia tissue tissue . . . . Exposure of promyeloblastic leukemia cells for 24 h to 2 mM of the weak histone deacetylase inhibitor phenylbutyrate resulted in enhanced and marked expression of BCRP. Chromatin immunoprecipitation Human leukemia stem cell-like cell line (KG-1a) Down RT-qPCR . . . . . ref3436 . . . . . . . . . . DTD0020 Slc10a2 1 Hyperacetylation of Slc10a2 in liver (compare with kidney and cerebrum cells) Hyperacetylation of Slc10a2 in liver (compare with kidney and cerebrum cells) ad EP10121 . . . Histone acetylation Rat liver Histone acetylation Histone_acetylation Rat liver . Rat_liver tissue tissue Promoter . H3 . The histone H3 associated with Oatp1b2 promoters was hyperacetylated in the liver but was acetylated very little in the kidney and cerebrum. Chromatin immunoprecipitation Model organism in vivo (mouse) Up RT-qPCR . . . . . ref3435 . . . . . . . . . . DTD0083 Slc12a2 1 Hypoacetylation of Slc12a2 in hypertension (compare with Ang II-treatment counterpart hypertension rats) Hypoacetylation of Slc12a2 in hypertension (compare with Ang II-treatment counterpart hypertension rats) adb EP09082 . . . Histone acetylation Hypertension Histone acetylation Histone_acetylation Hypertension BA00-BA04 Hypertension tissue tissue Promoter . H3 . Slc12a2 is upregulated via histone modification in the aortas of Ang II-induced hypertensive SD rats. Chromatin immunoprecipitation Model organism in vivo (mouse) Down RT-qPCR . . . . . ref3441 . . . . . . . . . . DTD0083 Slc12a2 1 Hyperacetylation of Slc12a2 in hypertension (compare with normal rats) Hyperacetylation of Slc12a2 in hypertension (compare with normal rats) ad EP09083 . . . Histone acetylation Hypertension Histone acetylation Histone_acetylation Hypertension BA00-BA04 Hypertension tissue tissue Promoter . H3K4 . The increased levels of mRNA expression correlated with increment of acetylation on H3K4 at the Slc12a2 promoter region in spontaneously hypertensive rat. Chromatin immunoprecipitation Model organism in vivo (mouse) Up RT-qPCR . . . . . ref3438 . . . . . . . . . . DTD0086 Slc12a5 1 Hypoacetylation of Slc12a5 in inflammatory pain (compare with normal rats) Hypoacetylation of Slc12a5 in inflammatory pain (compare with normal rats) adb EP09034 . . . Histone acetylation Inflammatory pain Histone acetylation Histone_acetylation Inflammatory pain MG30.42 Inflammatory_pain tissue tissue Promoter . H3 . Promoter histone acetylation plays a role in complete Freund's adjuvantinduced suppression of SLC12A5 in the spinal dorsal horn. Chromatin immunoprecipitation Model organism in vivo (mouse) Down Western Blot . . . . . ref3454 . . . . . . . . . . DTD0086 Slc12a5 1 Hypoacetylation of Slc12a5 in inflammatory pain (compare with normal rats) Hypoacetylation of Slc12a5 in inflammatory pain (compare with normal rats) adb EP09034 . . . Histone acetylation Inflammatory pain Histone acetylation Histone_acetylation Inflammatory pain MG30.42 Inflammatory_pain tissue tissue Promoter . H4 . Promoter histone acetylation plays a role in complete Freund's adjuvantinduced suppression of SLC12A5 in the spinal dorsal horn. Chromatin immunoprecipitation Model organism in vivo (mouse) Down Western Blot . . . . . ref3454 . . . . . . . . . . DTD0086 Slc12a5 1 Hypoacetylation of Slc12a5 in bone cancer pain (compare with normal rats) Hypoacetylation of Slc12a5 in bone cancer pain (compare with normal rats) adb EP09035 . . . Histone acetylation Bone cancer pain Histone acetylation Histone_acetylation Bone cancer pain MG30.1 Bone_cancer_pain tissue tissue Promoter . . . Suppression of HDAC2 in spinal cord alleviates mechanical hyperalgesia and restores KCC2 expression in a rat model of bone cancer pain. Chromatin immunoprecipitation Model organism in vivo (mouse) Down Western Blot . . . . . ref3466 . . . . . . . . . . DTD0100 Slc16a1 1 Hypoacetylation of Slc16a1 in oligodendrocyte precursors (compare with oligodendrocyte) Hypoacetylation of Slc16a1 in oligodendrocyte precursors (compare with oligodendrocyte) ad EP08723 . . . Histone acetylation Oligodendrocyte precursors Histone acetylation Histone_acetylation Oligodendrocyte precursors . Oligodendrocyte_precursors tissue tissue Promoter . H3K9 . There was a significant negative correlation between H3K9ac in the Slc16a1 promoter and Slc16a1 expression. Chromatin immunoprecipitation Model organism in vivo (mouse) Up RT-qPCR . . . . . ref3464 . . . . . . . . . . DTD0111 SLC16A7 1 Hypoacetylation of SLC16A7 in breast cancer (compare with beta-hydroxybutyrate-treatment counterpart cells) Hypoacetylation of SLC16A7 in breast cancer (compare with beta-hydroxybutyrate-treatment counterpart cells) adf EP08322 . . . Histone acetylation Breast cancer Histone acetylation Histone_acetylation Breast cancer 2C60-2C6Z Breast_cancer tissue tissue . . H3K9 . "Treatment with -hydroxybutyrate, breast cancer cells expressing MCT2 increase the global histone H3K9 acetylation and upregulate several tumour-promoting genes." Chromatin immunoprecipitation Multiple cell lines of human Down RT-qPCR . . . . . ref3459 . . . . . . . . . . DTD0128 SLC19A3 1 Hypoacetylation of SLC19A3 in colon cancer (compare with trichostatin A-treatment counterpart cells) Hypoacetylation of SLC19A3 in colon cancer (compare with trichostatin A-treatment counterpart cells) adb EP08027 . . . Histone acetylation Colon cancer Histone acetylation Histone_acetylation Colon cancer 2B90 Colon_cancer tissue tissue Promoter . H3 . TSA treatment increased histone H3 acetylation of SLC19A3 promoter region in all 4 colon cancer cell lines examined. Chromatin immunoprecipitation Multiple cell lines of human Down RT-qPCR . . . . . ref3440 . . . . . . . . . . DTD0128 SLC19A3 1 Hypoacetylation of SLC19A3 in colon cancer (compare with TSA-treatment counterpart cells) Hypoacetylation of SLC19A3 in colon cancer (compare with TSA-treatment counterpart cells) adb EP10665 . . . Histone acetylation Colon cancer Histone acetylation Histone_acetylation Colon cancer 2B90 Colon_cancer tissue tissue Promoter . . . "In the 4 colon cancer cells examined, SLC19A3 mRNA expression is down-regulated by histone deacetylation." Chromatin immunoprecipitation Multiple cell lines of human Down RT-qPCR . . . . . ref3440 . . . . . . . . . . DTD0133 SLC1A5 1 Hyperacetylation of SLC1A5 in chronic social defeat stress (compare with normal control mice) Hyperacetylation of SLC1A5 in chronic social defeat stress (compare with normal control mice) ad EP07787 . . . Histone acetylation Chronic social defeat stress Histone acetylation Histone_acetylation Chronic social defeat stress QE01 Chronic_social_defeat_stress tissue tissue Promoter . H3K9 . Chronic social stress activates ASCT2 transcription via histone acetylation in its promoter. Chromatin immunoprecipitation Model organism in vivo (mouse) Up RT-qPCR . . . . . ref3460 . . . . . . . . . . DTD0133 SLC1A5 1 Hyperacetylation of SLC1A5 in chronic social defeat stress (compare with normal control mice) Hyperacetylation of SLC1A5 in chronic social defeat stress (compare with normal control mice) ad EP07787 . . . Histone acetylation Chronic social defeat stress Histone acetylation Histone_acetylation Chronic social defeat stress QE01 Chronic_social_defeat_stress tissue tissue Promoter . H3K27 . Chronic social stress activates ASCT2 transcription via histone acetylation in its promoter. Chromatin immunoprecipitation Model organism in vivo (mouse) Up RT-qPCR . . . . . ref3460 . . . . . . . . . . DTD0006 SLC22A2 1 Hypoacetylation of SLC22A2 in renal cell carcinoma Hypoacetylation of SLC22A2 in renal cell carcinoma adb EP10490 . . . Histone acetylation Renal cell carcinoma Histone acetylation Histone_acetylation Renal cell carcinoma 2C90 Renal_cell_carcinoma tissue tissue Promoter . H3K18 . "Combined treatment using the DNA methylation inhibitor decitabine and the histone deacetylase inhibitor vorinostat significantly increased the expression of OCT2 in RCC cell lines, which sensitized these cells to oxaliplatin." Chromatin immunoprecipitation Patients samples of human; Multiple cell lines of human Down RT-qPCR . . . . . ref3473 . . . . . . . . . . DTD0006 SLC22A2 1 Hypoacetylation of SLC22A2 in renal cell carcinoma Hypoacetylation of SLC22A2 in renal cell carcinoma adb EP10490 . . . Histone acetylation Renal cell carcinoma Histone acetylation Histone_acetylation Renal cell carcinoma 2C90 Renal_cell_carcinoma tissue tissue Promoter . H3K27 . "Combined treatment using the DNA methylation inhibitor decitabine and the histone deacetylase inhibitor vorinostat significantly increased the expression of OCT2 in RCC cell lines, which sensitized these cells to oxaliplatin." Chromatin immunoprecipitation Patients samples of human; Multiple cell lines of human Down RT-qPCR . . . . . ref3473 . . . . . . . . . . DTD0005 SLC22A7 1 Hypoacetylation of SLC22A7 in Hepatocellular carcinoma (compare with non-tumor adjacent tissue) Hypoacetylation of SLC22A7 in Hepatocellular carcinoma (compare with non-tumor adjacent tissue) ab EP20000 . . . Histone acetylation Hepatocellular carcinoma Histone acetylation Histone_acetylation Hepatocellular carcinoma 2C12.02 Hepatocellular_carcinoma tissue tissue Promoter . H3K18 . Significant increases in SLC22A7 mRNA were observed when these cancer cells were cultured in the presence of histone deacetylase (HDAC) inhibitors. RT-qPCR Hepatocellular carcinoma cell lines (BEL-7402 and SMMC-7721) Down Western Blot . . . . . ref6001 . . . . . . . . . . DTD0158 SLC23A1 1 Hypoacetylation of SLC23A1 in colon (compare with jejunum tissue of human) Hypoacetylation of SLC23A1 in colon (compare with jejunum tissue of human) adb EP07375 . . . Histone acetylation Colon Histone acetylation Histone_acetylation Colon . Colon tissue tissue Promoter . H3K9 . Lower levels of H3 acethylation of lysine 9 and lower gene expression was observed in the SLC23A1 promoter in the colon. Chromatin immunoprecipitation Patients samples of human Down RT-qPCR . . . . . ref3456 . . . . . . . . . . DTD0159 SLC23A2 1 Hypoacetylation of SLC23A2 in colon (compare with jejunum tissue of human) Hypoacetylation of SLC23A2 in colon (compare with jejunum tissue of human) adb EP07343 . . . Histone acetylation Colon Histone acetylation Histone_acetylation Colon . Colon tissue tissue Promoter . H3K9 . Lower levels of H3 acethylation of lysine 9 and lower gene expression was observed in the SLC23A2 promoter in the colon. Chromatin immunoprecipitation Patients samples of human Down RT-qPCR . . . . . ref3456 . . . . . . . . . . DTD0170 SLC25A12 1 Hyperacetylation of SLC25A12 in hepatocellular carcinoma (compare with normal human hepatocytes) Hyperacetylation of SLC25A12 in hepatocellular carcinoma (compare with normal human hepatocytes) ad EP07085 . . . Histone acetylation Hepatocellular carcinoma Histone acetylation Histone_acetylation Hepatocellular carcinoma 2C12.02 Hepatocellular_carcinoma tissue tissue Promoter . H3 . SLC25A12 is epigenetically induced in HCC by mechanisms involving histone acetylation but not DNA methylation. Chromatin immunoprecipitation Human hepatocellular carcinoma cell line (HepG2) Up Western Blot . . . . . ref0805 . . . . . . . . . . DTD0170 SLC25A12 1 Hyperacetylation of SLC25A12 in hepatocellular carcinoma (compare with normal human hepatocytes) Hyperacetylation of SLC25A12 in hepatocellular carcinoma (compare with normal human hepatocytes) ad EP07085 . . . Histone acetylation Hepatocellular carcinoma Histone acetylation Histone_acetylation Hepatocellular carcinoma 2C12.02 Hepatocellular_carcinoma tissue tissue Promoter . H4 . SLC25A12 is epigenetically induced in HCC by mechanisms involving histone acetylation but not DNA methylation. Chromatin immunoprecipitation Human hepatocellular carcinoma cell line (HepG2) Up Western Blot . . . . . ref0805 . . . . . . . . . . DTD0230 SLC26A2 1 Hypoacetylation of SLC26A2 in colon cancer (compare with normal counterpart cells) Hypoacetylation of SLC26A2 in colon cancer (compare with normal counterpart cells) adb EP06119 . . . Histone acetylation Colon cancer Histone acetylation Histone_acetylation Colon cancer 2B90 Colon_cancer tissue tissue Promoter . H3K9 . Significant increases in SLC26A2 mRNA were observed when these cancer cells were cultured in the presence of histone deacetylase (HDAC) inhibitors. Chromatin immunoprecipitation Multiple cell lines of human Down RT-qPCR . . . . . ref3437 . . . . . . . . . . DTD0245 SLC28A2 1 Hypoacetylation of SLC28A2 in colorectal cancer Hypoacetylation of SLC28A2 in colorectal cancer adb EP05685 . . . Histone acetylation Colorectal cancer Histone acetylation Histone_acetylation Colorectal cancer 2B91 Colorectal_cancer tissue tissue Promoter . H3K9 . Histone hypoacetylation due to increased levels of histone deacetylase 7 results in CNT2 repression in CRC tumour tissue and could lead to decreased uptake of and consequent resistance to nucleoside anti-cancer agents. Chromatin immunoprecipitation Multiple cell lines of human Down Western Blot . . . . . ref1747 . . . . . . . . . . DTD0245 SLC28A2 1 Hypoacetylation of SLC28A2 in colorectal cancer Hypoacetylation of SLC28A2 in colorectal cancer adb EP05685 . . . Histone acetylation Colorectal cancer Histone acetylation Histone_acetylation Colorectal cancer 2B91 Colorectal_cancer tissue tissue Promoter . H3K18 . Histone hypoacetylation due to increased levels of histone deacetylase 7 results in CNT2 repression in CRC tumour tissue and could lead to decreased uptake of and consequent resistance to nucleoside anti-cancer agents. Chromatin immunoprecipitation Multiple cell lines of human Down Western Blot . . . . . ref1747 . . . . . . . . . . DTD0245 SLC28A2 1 Hypoacetylation of SLC28A2 in colorectal cancer Hypoacetylation of SLC28A2 in colorectal cancer adb EP05685 . . . Histone acetylation Colorectal cancer Histone acetylation Histone_acetylation Colorectal cancer 2B91 Colorectal_cancer tissue tissue Promoter . H4 . Histone hypoacetylation due to increased levels of histone deacetylase 7 results in CNT2 repression in CRC tumour tissue and could lead to decreased uptake of and consequent resistance to nucleoside anti-cancer agents. Chromatin immunoprecipitation Multiple cell lines of human Down Western Blot . . . . . ref1747 . . . . . . . . . . DTD0251 SLC2A1 1 Hypoacetylation of SLC2A1 in rat brain astrocytes (compare with valproic acid treatment counterpart cells) Hypoacetylation of SLC2A1 in rat brain astrocytes (compare with valproic acid treatment counterpart cells) adb EP05470 . . . Histone acetylation Rat brain astrocyte Histone acetylation Histone_acetylation Rat brain astrocyte . Rat_brain_astrocyte tissue tissue Promoter . . . Valproic acid could increase SLC2A1 gene expression by increasing histone acetylation at the SLC2A1 promotor. Chromatin immunoprecipitation Model organism in vivo (mouse) Down RT-qPCR . . . . . ref3442 . . . . . . . . . . DTD0251 SLC2A1 1 Hyperacetylation of SLC2A1 in fasted mice brain (compare with normal counterpart cells) Hyperacetylation of SLC2A1 in fasted mice brain (compare with normal counterpart cells) ad EP05472 . . . Histone acetylation Mice brain Histone acetylation Histone_acetylation Mice brain . Mice_brain tissue tissue Promoter . H3K9 . Fasting-induced production of the ketone body -hydroxybutyrate (-OHB) enhances expression of the glucose transporter gene Slc2a1 (Glut1) via histone modification. Chromatin immunoprecipitation Model organism in vivo (mouse) Up RT-qPCR . . . . . ref3457 . . . . . . . . . . DTD0257 SLC2A2 1 Hypoacetylation of SLC2A2 in type 2 diabetes (compare with counterpart normal rat cells) Hypoacetylation of SLC2A2 in type 2 diabetes (compare with counterpart normal rat cells) adb EP05265 . . . Histone acetylation Type 2 diabetes Histone acetylation Histone_acetylation Type 2 diabetes 5A11 Type_2_diabetes tissue tissue Promoter . H3 . Decreased H3 acetylation basically was correlated with decreased Glut2 gene expression. Chromatin immunoprecipitation Model organism in vivo (mouse) Down RT-qPCR . . . . . ref3449 . . . . . . . . . . DTD0257 Slc2a2 1 Hyperacetylation of Slc2a2 in high concentrations of glucose (compare with low concentrations of glucose counterpart cells) Hyperacetylation of Slc2a2 in high concentrations of glucose (compare with low concentrations of glucose counterpart cells) ad EP05267 . . . Histone acetylation High concentrations of glucose Histone acetylation Histone_acetylation High concentrations of glucose . High_concentrations_of_glucose tissue tissue Promoter . H4 . High levels of glucose (30 mM) cause hyperacetylation of histone H4 at both insulin and Slc2a2 gene promoters in MIN6 cells. Chromatin immunoprecipitation Mouse insulinoma 6 cells Up RT-qPCR . . . . . ref3433 . . . . . . . . . . DTD0258 SLC2A3 1 Hypoacetylation of SLC2A3 in non-small cell lung cancer (compare with Vorinostat-treatment counterpart cells) Hypoacetylation of SLC2A3 in non-small cell lung cancer (compare with Vorinostat-treatment counterpart cells) adb EP05252 . . . Histone acetylation Non-small cell lung cancer Histone acetylation Histone_acetylation Non-small cell lung cancer 2C25.4 Non-small_cell_lung_cancer tissue tissue Promoter . . . SLC2A3 expression can be induced or increased following inhibition of histone deacetylases in non-small cell lung cancer cell lines. Chromatin immunoprecipitation Multiple cell lines of human Down RT-qPCR . . . . . ref3446 . . . . . . . . . . DTD0262 SLC2A4 1 Hypoacetylation of SLC2A4 in type 2 diabete (compare with counterpart normal rat cells) Hypoacetylation of SLC2A4 in type 2 diabete (compare with counterpart normal rat cells) adb EP05188 . . . Histone acetylation Type 2 diabetes Histone acetylation Histone_acetylation Type 2 diabetes 5A11 Type_2_diabetes tissue tissue Promoter . H3 . The Type 2 diabetes reduced the H3Kac which would decrease the binding of transcription factors. Chromatin immunoprecipitation Model organism in vivo (mouse) Down Western Blot . . . . . ref3469 . . . . . . . . . . DTD0262 SLC2A4 1 Hypoacetylation of SLC2A4 in type 1 diabete (compare with counterpart normal rat cells) Hypoacetylation of SLC2A4 in type 1 diabete (compare with counterpart normal rat cells) adb EP05189 . . . Histone acetylation Type 1 diabetes Histone acetylation Histone_acetylation Type 1 diabetes 5A10 Type_1_diabetes tissue tissue Promoter . H3 . The Type 1 diabetes reduced the H3Kac which would decrease the binding of transcription factors. Chromatin immunoprecipitation Model organism in vivo (mouse) Down Western Blot . . . . . ref3469 . . . . . . . . . . DTD0262 SLC2A4 1 Hypoacetylation of SLC2A4 in non-small cell lung cancer (compare with Vorinostat-treatment counterpart cells) Hypoacetylation of SLC2A4 in non-small cell lung cancer (compare with Vorinostat-treatment counterpart cells) adb EP05190 . . . Histone acetylation Non-small cell lung cancer Histone acetylation Histone_acetylation Non-small cell lung cancer 2C25.4 Non-small_cell_lung_cancer tissue tissue Promoter . . . SLC2A4 expression can be induced or increased following inhibition of histone deacetylases in non-small cell lung cancer cell lines. Chromatin immunoprecipitation Multiple cell lines of human Down RT-qPCR . . . . . ref3446 . . . . . . . . . . DTD0263 SLC2A5 1 Hypoacetylation of SLC2A5 in fructose force-fed mice (compare with glucose force-fed mice) Hypoacetylation of SLC2A5 in fructose force-fed mice (compare with glucose force-fed mice) ad EP05144 . . . Histone acetylation Fructose-fed mice Histone acetylation Histone_acetylation Fructose-fed mice . Fructose-fed_mice tissue tissue Promoter . H3 . Jejunal expression of Slc2a5 by fructose force-feeding involved inducing the acetylation of histone H3 at K9 and of H4 at K5/16 around the Slc2a5 gene. Chromatin immunoprecipitation Model organism in vivo (mouse) Up RT-qPCR . . . . . ref3445 . . . . . . . . . . DTD0263 SLC2A5 1 Hypoacetylation of SLC2A5 in fructose force-fed mice (compare with glucose force-fed mice) Hypoacetylation of SLC2A5 in fructose force-fed mice (compare with glucose force-fed mice) ad EP05144 . . . Histone acetylation Fructose-fed mice Histone acetylation Histone_acetylation Fructose-fed mice . Fructose-fed_mice tissue tissue Promoter . H4 . Jejunal expression of Slc2a5 by fructose force-feeding involved inducing the acetylation of histone H3 at K9 and of H4 at K5/16 around the Slc2a5 gene. Chromatin immunoprecipitation Model organism in vivo (mouse) Up RT-qPCR . . . . . ref3445 . . . . . . . . . . DTD0329 SLC38A2 1 Hyperacetylation of SLC38A2 in activated amino acid response signaling pathways (compare with unfolded protein response signaling pathways) Hyperacetylation of SLC38A2 in activated amino acid response signaling pathways (compare with unfolded protein response signaling pathways) ad EP03655 . . . Histone acetylation Activated amino acid response signaling pathways Histone acetylation Histone_acetylation Activated amino acid response signaling pathways . Activated_amino_acid_response_signaling_pathways tissue tissue Promoter . H3 . Hyperacetylation of histone H3 and recruitment of the general transcription factors at the HepG2 SLC38A2 promoter occurred in response to the activated amino acid but not the unfolded protein. Chromatin immunoprecipitation Human hepatocellular carcinoma cell line (HepG2) Up RT-qPCR . . . . . ref3434 . . . . . . . . . . DTD0331 SLC38A4 1 Hypocetylation of SLC38A4 in retinoic acid receptors (RAR) expression cells (compare with counterpart RAR knockout cells) Hypocetylation of SLC38A4 in retinoic acid receptors (RAR) expression cells (compare with counterpart RAR knockout cells) adb EP03553 . . . Histone acetylation Retinoic acid receptors (RAR) expression cells Histone acetylation Histone_acetylation Retinoic acid receptors (RAR) expression cells . Retinoic_acid_receptors_(RAR)_expression_cells tissue tissue Promoter . H3K9 . Increased SLC38A4 transcript levels was associated with decreased promoter CpG-island methylation and increased permissive histone modifications (H3K9/K14ac) in RAR knockout cells. Chromatin immunoprecipitation Multiple cell lines of human Down RT-qPCR . . . . . ref3439 . . . . . . . . . . DTD0331 SLC38A4 1 Hypocetylation of SLC38A4 in retinoic acid receptors (RAR) expression cells (compare with counterpart RAR knockout cells) Hypocetylation of SLC38A4 in retinoic acid receptors (RAR) expression cells (compare with counterpart RAR knockout cells) adb EP03553 . . . Histone acetylation Retinoic acid receptors (RAR) expression cells Histone acetylation Histone_acetylation Retinoic acid receptors (RAR) expression cells . Retinoic_acid_receptors_(RAR)_expression_cells tissue tissue Promoter . H3K14 . Increased SLC38A4 transcript levels was associated with decreased promoter CpG-island methylation and increased permissive histone modifications (H3K9/K14ac) in RAR knockout cells. Chromatin immunoprecipitation Multiple cell lines of human Down RT-qPCR . . . . . ref3439 . . . . . . . . . . DTD0028 SLC47A2 1 Hyperacetylation of SLC47A2 in renal cell carcinoma (compare with adjacent counterpart normal cells) Hyperacetylation of SLC47A2 in renal cell carcinoma (compare with adjacent counterpart normal cells) adb EP09964 . . . Histone acetylation Renal cell carcinoma Histone acetylation Histone_acetylation Renal cell carcinoma 2C90 Renal_cell_carcinoma tissue tissue Promoter . H3K27 . H3K27AC might play a repressive role in the expression of SLC47A2 in RCC. Chromatin immunoprecipitation Patients samples of human Down RT-qPCR . . . . . ref3455 . . . . . . . . . . DTD0425 SLC5A5 1 Hypoacetylation of SLC5A5 in thyroid cancer (compare with counterpart healthy thyroid cells) Hypoacetylation of SLC5A5 in thyroid cancer (compare with counterpart healthy thyroid cells) adb EP01976 . . . Histone acetylation Thyroid cancer Histone acetylation Histone_acetylation Thyroid cancer 2D10 Thyroid_cancer tissue tissue Promoter . H3K9 . Histone deacetylation occurred on all these lysine residues of histones at the SLC5A5 promoter upon the activation of MAPK by BRAF V600E. Chromatin immunoprecipitation Multiple cell lines of human and rat Down Western Blot . . . . . ref3447 . . . . . . . . . . DTD0425 SLC5A5 1 Hypoacetylation of SLC5A5 in thyroid cancer (compare with counterpart healthy thyroid cells) Hypoacetylation of SLC5A5 in thyroid cancer (compare with counterpart healthy thyroid cells) adb EP01976 . . . Histone acetylation Thyroid cancer Histone acetylation Histone_acetylation Thyroid cancer 2D10 Thyroid_cancer tissue tissue Promoter . H3K14 . Histone deacetylation occurred on all these lysine residues of histones at the SLC5A5 promoter upon the activation of MAPK by BRAF V600E. Chromatin immunoprecipitation Multiple cell lines of human and rat Down Western Blot . . . . . ref3447 . . . . . . . . . . DTD0425 SLC5A5 1 Hypoacetylation of SLC5A5 in thyroid cancer (compare with counterpart healthy thyroid cells) Hypoacetylation of SLC5A5 in thyroid cancer (compare with counterpart healthy thyroid cells) adb EP01976 . . . Histone acetylation Thyroid cancer Histone acetylation Histone_acetylation Thyroid cancer 2D10 Thyroid_cancer tissue tissue Promoter . H3K18 . Histone deacetylation occurred on all these lysine residues of histones at the SLC5A5 promoter upon the activation of MAPK by BRAF V600E. Chromatin immunoprecipitation Multiple cell lines of human and rat Down Western Blot . . . . . ref3447 . . . . . . . . . . DTD0425 SLC5A5 1 Hypoacetylation of SLC5A5 in thyroid cancer (compare with counterpart healthy thyroid cells) Hypoacetylation of SLC5A5 in thyroid cancer (compare with counterpart healthy thyroid cells) adb EP01976 . . . Histone acetylation Thyroid cancer Histone acetylation Histone_acetylation Thyroid cancer 2D10 Thyroid_cancer tissue tissue Promoter . H4K16 . Histone deacetylation occurred on all these lysine residues of histones at the SLC5A5 promoter upon the activation of MAPK by BRAF V600E. Chromatin immunoprecipitation Multiple cell lines of human and rat Down Western Blot . . . . . ref3447 . . . . . . . . . . DTD0425 SLC5A5 1 Hypoacetylation of SLC5A5 in thyroid cancer (compare with counterpart healthy thyroid cells) Hypoacetylation of SLC5A5 in thyroid cancer (compare with counterpart healthy thyroid cells) adb EP01976 . . . Histone acetylation Thyroid cancer Histone acetylation Histone_acetylation Thyroid cancer 2D10 Thyroid_cancer tissue tissue Promoter . H3K9 . The underlying mechanism of HDACi-induced upregulation of SLC5A5 gene expression via improving the acetylation status of histone at the promoter was elucidated directly by ChIP assay Chromatin immunoprecipitation Multiple cell lines of human Down Western Blot . . . . . ref3471 . . . . . . . . . . DTD0425 SLC5A5 1 Hypoacetylation of SLC5A5 in thyroid cancer (compare with counterpart healthy thyroid cells) Hypoacetylation of SLC5A5 in thyroid cancer (compare with counterpart healthy thyroid cells) adb EP01976 . . . Histone acetylation Thyroid cancer Histone acetylation Histone_acetylation Thyroid cancer 2D10 Thyroid_cancer tissue tissue Promoter . H3K14 . The underlying mechanism of HDACi-induced upregulation of SLC5A5 gene expression via improving the acetylation status of histone at the promoter was elucidated directly by ChIP assay Chromatin immunoprecipitation Multiple cell lines of human Down Western Blot . . . . . ref3471 . . . . . . . . . . DTD0425 SLC5A5 1 Hypoacetylation of SLC5A5 in thyroid cancer (compare with counterpart healthy thyroid cells) Hypoacetylation of SLC5A5 in thyroid cancer (compare with counterpart healthy thyroid cells) adb EP01976 . . . Histone acetylation Thyroid cancer Histone acetylation Histone_acetylation Thyroid cancer 2D10 Thyroid_cancer tissue tissue Promoter . H4K16 . The underlying mechanism of HDACi-induced upregulation of SLC5A5 gene expression via improving the acetylation status of histone at the promoter was elucidated directly by ChIP assay Chromatin immunoprecipitation Multiple cell lines of human Down Western Blot . . . . . ref3471 . . . . . . . . . . DTD0425 SLC5A5 1 Hypoacetylation of SLC5A5 in breast cancer (compare with SAHA treatment counterpart cells) Hypoacetylation of SLC5A5 in breast cancer (compare with SAHA treatment counterpart cells) adb EP01977 . . . Histone acetylation Breast cancer Histone acetylation Histone_acetylation Breast cancer 2C60-2C6Z Breast_cancer tissue tissue Promoter . H3 . Levels of acetylated K9 and K14 were increased in high-responsive cells (MDA468) and reduced in low-responsive cells (MDA157). It is possible to hypothesize that decrease of H3 histone acetylation in low-responsive cells is not permissive for induction of high levels of NIS mRNA upon SAHA treatment. Chromatin immunoprecipitation Multiple cell lines of human Down Western Blot . . . . . ref3448 . . . . . . . . . . DTD0452 SLC6A2 1 Hyperacetylation of SLC6A2 in corticotropin releasing factor (CRF) treatment neuroblastoma cells (compare with counterpart neuroblastoma cells) Hyperacetylation of SLC6A2 in corticotropin releasing factor (CRF) treatment neuroblastoma cells (compare with counterpart neuroblastoma cells) ad EP10664 . . . Histone acetylation Neuroblastoma cells treatment with CRF Histone acetylation Histone_acetylation Neuroblastoma cells treatment with CRF . Neuroblastoma_cells_treatment_with_CRF tissue tissue Promoter . H3 . Chromatin immunoprecipitation assays confirm an increased acetylation of histone H3 on the NET promoter following treatment with CRF. Chromatin immunoprecipitation Multiple cell lines of human Up RT-qPCR . . . . . ref3731 . . . . . . . . . . DTD0455 Slc6a3 1 Hypoacetylation of Slc6a3 in rat dopaminergic cell (compare with valproate-treatment counterpart cells) Hypoacetylation of Slc6a3 in rat dopaminergic cell (compare with valproate-treatment counterpart cells) adb EP01623 . . . Histone acetylation Rat dopaminergic cell Histone acetylation Histone_acetylation Rat dopaminergic cell . Rat_dopaminergic_cell tissue tissue Promoter . H3K9 . Valproate treatment results in enhanced histone acetylation at the Slc6a3 promoter in cultured rat N27 cells. Chromatin immunoprecipitation Rat dopaminergic cell line (N27) Down RT-qPCR . . . . . ref3461 . . . . . . . . . . DTD0455 Slc6a3 1 Hypoacetylation of Slc6a3 in rat dopaminergic cell (compare with valproate-treatment counterpart cells) Hypoacetylation of Slc6a3 in rat dopaminergic cell (compare with valproate-treatment counterpart cells) adb EP01623 . . . Histone acetylation Rat dopaminergic cell Histone acetylation Histone_acetylation Rat dopaminergic cell . Rat_dopaminergic_cell tissue tissue Promoter . H3K14 . Valproate treatment results in enhanced histone acetylation at the Slc6a3 promoter in cultured rat N27 cells. Chromatin immunoprecipitation Rat dopaminergic cell line (N27) Down RT-qPCR . . . . . ref3461 . . . . . . . . . . DTD0456 SLC6A4 1 Hypoacetylation of SLC6A4 in several types of cancer (compare with trichostatin A treatment counterpart cells) Hypoacetylation of SLC6A4 in several types of cancer (compare with trichostatin A treatment counterpart cells) adb EP01605 . . . Histone acetylation Several types of cancer Histone acetylation Histone_acetylation Several types of cancer 2A00-2F9Z Several_types_of_cancer tissue tissue Promoter . H4 . SLC6A4 gene is epigenetically downregulated by HDAC1 in several types of cancer. Chromatin immunoprecipitation Multiple cell lines of human Down Western Blot . . . . . ref3451 . . . . . . . . . . DTD0456 SLC6A4 1 Hypoacetylation of SLC6A4 in epithelial colorectal adenocarcinoma (compare with butyrate-treatment counterpart cells) Hypoacetylation of SLC6A4 in epithelial colorectal adenocarcinoma (compare with butyrate-treatment counterpart cells) adb EP01606 . . . Histone acetylation Epithelial colorectal adenocarcinoma Histone acetylation Histone_acetylation Colorectal cancer 2B91 Epithelial_colorectal_adenocarcinoma tissue tissue Promoter . H3 . The SLC6A4 promoter 1 region appears to be specifically modulated by alterations in the acetylation (but not methylation) status of histone H3. Chromatin immunoprecipitation Human epithelial colorectal adenocarcinoma cells (Caco-2) Down Western Blot . . . . . ref3443 . . . . . . . . . . DTD0456 SLC6A4 1 Hypoacetylation of SLC6A4 in epithelial colorectal adenocarcinoma (compare with butyrate-treatment counterpart cells) Hypoacetylation of SLC6A4 in epithelial colorectal adenocarcinoma (compare with butyrate-treatment counterpart cells) adb EP01606 . . . Histone acetylation Epithelial colorectal adenocarcinoma Histone acetylation Histone_acetylation Colorectal cancer 2B91 Epithelial_colorectal_adenocarcinoma tissue tissue Promoter . H4 . The SLC6A4 promoter 1 region appears to be specifically modulated by alterations in the acetylation (but not methylation) status of histone H4. Chromatin immunoprecipitation Human epithelial colorectal adenocarcinoma cells (Caco-2) Down Western Blot . . . . . ref3443 . . . . . . . . . . DTD0456 SLC6A4 1 Hypoacetylation of SLC6A4 in neuroblastoma cells (compare with TSA-treatment counterpart cells) Hypoacetylation of SLC6A4 in neuroblastoma cells (compare with TSA-treatment counterpart cells) adf EP10666 . . . Histone acetylation Neuroblastoma cells Histone acetylation Histone_acetylation Neuroblastoma cells . Neuroblastoma_cells tissue tissue . . . . Dramatic upregulation of dopamine and serotonin transporter expression by inhibition of histone deacetylases. Chromatin immunoprecipitation Human neuroblastoma cell line (SK-NF-I) Down Western Blot . . . . . ref3732 . . . . . . . . . . DTD0021 SLC15A1 1 Hypoacetylation of SLC15A1 in Colorectal cancer Hypoacetylation of SLC15A1 in Colorectal cancer ag EP38517 . . . Histone deacetylation Colorectal cancer Histone deacetylation Histone_deacetylation Colorectal cancer 2B90 Colorectal_cancer tissue tissue Promoter (distal) . H3K18;H3K27 . "HDAC1-mediated histone deacetylation blocks P300-mediated H3K18/27Ac at the distal promoter, contributing to PEPT1 silencing." . "CRC cell lines, xenografts" Down "ChIP-qPCR,reporter assays,siRNA knockdown" . . . . . ref13334 . . . . . . . . . . DTD0083 Slc12a2 1 Lower level of histone dimethylation of Slc12a2 in hypertension (compare with normal rats) Lower level of histone dimethylation of Slc12a2 in hypertension (compare with normal rats) ada EP09080 . . . Histone dimethylation Hypertension Histone dimethylation Histone_dimethylation Hypertension BA00-BA04 Hypertension tissue tissue Promoter . H3K9 . The decreased levels of mRNA expression correlated with increment of dimethylation on H3K4 at the Slc12a2 promoter region in spontaneously hypertensive rat. Chromatin immunoprecipitation Model organism in vivo (mouse) Up RT-qPCR . . . . . ref3438 . . . . . . . . . . DTD0083 Slc12a2 1 Higher level of histone dimethylation of Slc12a2 in hypertension (compare with normal rats) Higher level of histone dimethylation of Slc12a2 in hypertension (compare with normal rats) ada EP09084 . . . Histone dimethylation Hypertension Histone dimethylation Histone_dimethylation Hypertension BA00-BA04 Hypertension tissue tissue Promoter . H3K4 . The increased levels of mRNA expression correlated with increment of dimethylation on H3K4 at the Slc12a2 promoter region in spontaneously hypertensive rat. Chromatin immunoprecipitation Model organism in vivo (mouse) Up RT-qPCR . . . . . ref3438 . . . . . . . . . . DTD0257 SLC2A2 1 Higher level of histone dimethylation of SLC2A2 in type 2 diabetes (compare with counterpart normal rat cells) Higher level of histone dimethylation of SLC2A2 in type 2 diabetes (compare with counterpart normal rat cells) adc EP05269 . . . Histone dimethylation Type 2 diabetes Histone dimethylation Histone_dimethylation Type 2 diabetes 5A11 Type_2_diabetes tissue tissue Promoter . H3K9 . Increased H3K9me2 levels basically was correlated with decreased Glut2 gene expression. Chromatin immunoprecipitation Model organism in vivo (mouse) Down RT-qPCR . . . . . ref3449 . . . . . . . . . . DTD0014 ABCB11 1 Histone methylation of ABCB11 in Hepatocellular carcinoma Histone methylation of ABCB11 in Hepatocellular carcinoma ag EP38514 . . . Histone methylation Hepatocellular carcinoma Histone methylation Histone_methylation Hepatocellular carcinoma 2C12 Hepatocellular_carcinoma tissue tissue Promoter . H3K27;H3K9 . "Alcohol exposure upregulates histone methyltransferases (RBBP-5/Suv39h1/ASH2L/SET7/9) and downregulates demethylases (JARID1a/b/c), leading to BSEP suppression. Altered BA homeostasis promotes HCC progression." . Ethanol-treated mice & HCC cells Down . . . . . . ref8661 . . . . . . . . . . DTD0014 ABCB11 1 Histone methylation of ABCB11 in Cholestasis Histone methylation of ABCB11 in Cholestasis ag EP38515 . . . Histone methylation Cholestasis Histone methylation Histone_methylation Cholestasis 5C50.1 Cholestasis tissue tissue Promoter . H3K4 . MLL3 (as part of ASCOM complex) mediates H3K4me3 for FXR/GR-dependent activation of BSEP. Downregulated in cholestasis leading to reduced BSEP expression. . CBDL mice & HepG2 cells Down RT-qPCR . . . . . ref13332 . . . . . . . . . . DTD0257 SLC2A2 1 Higher level of histone monomethylation of SLC2A2 in type 2 diabetes (compare with counterpart normal rat cells) Higher level of histone monomethylation of SLC2A2 in type 2 diabetes (compare with counterpart normal rat cells) add EP05268 . . . Histone monomethylation Type 2 diabetes Histone monomethylation Histone_monomethylation Type 2 diabetes 5A11 Type_2_diabetes tissue tissue Promoter . H3K9 . Increased H3K4me levels basically was correlated with decreased Glut2 gene expression. Chromatin immunoprecipitation Model organism in vivo (mouse) Down RT-qPCR . . . . . ref3449 . . . . . . . . . . DTD0083 Slc12a2 1 Hypoacetylation of Slc12a2 in hypertension (compare with Ang II-treatment counterpart hypertension rats) Hypoacetylation of Slc12a2 in hypertension (compare with Ang II-treatment counterpart hypertension rats) ade EP09082 . . . Histone trimethylation Hypertension Histone trimethylation Histone_trimethylation Hypertension BA00-BA04 Hypertension tissue tissue Promoter . H3K4 . Slc12a2 is upregulated via histone modification in the aortas of Ang II-induced hypertensive SD rats. Chromatin immunoprecipitation Model organism in vivo (mouse) Down RT-qPCR . . . . . ref3441 . . . . . . . . . . DTD0158 SLC23A1 1 Lower level of histone trimethylation of SLC23A1 in colon (compare with jejunum tissue of human) Lower level of histone trimethylation of SLC23A1 in colon (compare with jejunum tissue of human) ade EP07374 . . . Histone trimethylation Colon Histone trimethylation Histone_trimethylation Colon . Colon tissue tissue Promoter . H3K4 . Lower levels of H3 trimethylation of lysine 4 and lower gene expression was observed in the SLC23A1 promoter in the colon. Chromatin immunoprecipitation Patients samples of human Down RT-qPCR . . . . . ref3456 . . . . . . . . . . DTD0159 SLC23A2 1 Lower level of histone trimethylation of SLC23A2 in colon (compare with jejunum tissue of human) Lower level of histone trimethylation of SLC23A2 in colon (compare with jejunum tissue of human) ade EP07340 . . . Histone trimethylation Colon Histone trimethylation Histone_trimethylation Colon . Colon tissue tissue Promoter . H3K4 . Lower levels of H3 trimethylation of lysine 4 and lower gene expression was observed in the SLC23A2 promoter in the colon. Chromatin immunoprecipitation Patients samples of human Down RT-qPCR . . . . . ref3456 . . . . . . . . . . DTD0159 SLC23A2 1 Lower level of histone trimethylation of SLC23A2 in chronic alcohol exposure (compare with counterpart normal pancreatic acinar rat cells) Lower level of histone trimethylation of SLC23A2 in chronic alcohol exposure (compare with counterpart normal pancreatic acinar rat cells) ade EP07341 . . . Histone trimethylation Chronic alcohol exposure Histone trimethylation Histone_trimethylation Chronic alcohol exposure 6C40.2Z Chronic_alcohol_exposure tissue tissue Promoter . H3K4 . Chronic exposure of mouse pancreatic acinar tumor cells to alcohol is associated with a significant reduction in the level of expression of H3K4me3 (an activation mark) of the Slc23a2. Chromatin immunoprecipitation Model organism in vivo (mouse) Down Western Blot . . . . . ref3453 . . . . . . . . . . DTD0159 SLC23A2 1 Higher level of histone trimethylation of SLC23A2 in chronic alcohol exposure (compare with counterpart normal pancreatic acinar rat cells) Higher level of histone trimethylation of SLC23A2 in chronic alcohol exposure (compare with counterpart normal pancreatic acinar rat cells) ade EP07344 . . . Histone trimethylation Chronic alcohol exposure Histone trimethylation Histone_trimethylation Chronic alcohol exposure 6C40.2Z Chronic_alcohol_exposure tissue tissue Promoter . H3K27 . Chronic exposure of mouse pancreatic acinar tumor cells to alcohol is associated with a significant increase in the level of the H3K27me3 (a repressive mark) of the Slc23a2. Chromatin immunoprecipitation Model organism in vivo (mouse) Down Western Blot . . . . . ref3453 . . . . . . . . . . DTD0184 SLC25A23 1 Lower level of histone trimethylation of SLC25A23 in astrocytic tumors (compare with normal counterpart cells) Lower level of histone trimethylation of SLC25A23 in astrocytic tumors (compare with normal counterpart cells) adf EP06742 . . . Histone trimethylation Astrocytic tumors Histone trimethylation Histone_trimethylation Astrocytic tumors 2A00.0Y Astrocytic_tumors tissue tissue . . H3K27 . There is a direct role of H3K27me3 modification in epigenetically silencing the SLC25A23 gene expression. Chromatin immunoprecipitation Patients samples of human Down Western Blot . . . . . ref3458 . . . . . . . . . . DTD0230 SLC26A2 1 Lower level of histone trimethylation of SLC26A2 in colon cancer (compare with normal counterpart cells) Lower level of histone trimethylation of SLC26A2 in colon cancer (compare with normal counterpart cells) ade EP06118 . . . Histone trimethylation Colon cancer Histone trimethylation Histone_trimethylation Colon cancer 2B90 Colon_cancer tissue tissue Promoter . H3K4 . "Loss of H3 lysine 4 methylation was observed in cultured colon cancer cells with diminished SLC26A2 transcription, such as SW480, SW1083, and HT29." Chromatin immunoprecipitation Multiple cell lines of human Down RT-qPCR . . . . . ref3437 . . . . . . . . . . DTD0251 SLC2A1 1 Lower level of histone trimethylation of SLC2A1 in colon cancer (compare with counterpart JMJD2B knockdown cells) Lower level of histone trimethylation of SLC2A1 in colon cancer (compare with counterpart JMJD2B knockdown cells) ade EP05465 . . . Histone trimethylation Colon cancer Histone trimethylation Histone_trimethylation Colon cancer 2B90 Colon_cancer tissue tissue Promoter . H3K9 . Knockdown of JMJD2B after glucose deprivation caused decreased level of GLUT1 through increasing H3K9 tri-methylation levels on its promoter. Chromatin immunoprecipitation Multiple cell lines of human Down RT-qPCR . . . . . ref3463 . . . . . . . . . . DTD0262 SLC2A4 1 Lower level of histone trimethylation of SLC2A4 in type 2 diabete (compare with counterpart normal rat cells) Lower level of histone trimethylation of SLC2A4 in type 2 diabete (compare with counterpart normal rat cells) ade EP05187 . . . Histone trimethylation Type 2 diabetes Histone trimethylation Histone_trimethylation Type 2 diabetes 5A11 Type_2_diabetes tissue tissue Promoter . H3K9 . "The Type 2 diabetes reduced the H3Kac and increased the H3K9me3 content, and insulin treatment reversed only the H3K9me3 modification." Chromatin immunoprecipitation Model organism in vivo (mouse) Down Western Blot . . . . . ref3469 . . . . . . . . . . DTD0262 SLC2A4 1 Higher level of histone trimethylation of SLC2A4 in type 1 diabete (compare with counterpart normal rat cells) Higher level of histone trimethylation of SLC2A4 in type 1 diabete (compare with counterpart normal rat cells) ade EP05192 . . . Histone trimethylation Type 1 diabetes Histone trimethylation Histone_trimethylation Type 1 diabetes 5A10 Type_1_diabetes tissue tissue Promoter . H3K9 . "The Type 1 diabetes reduced the H3Kac and increased the H3K9me3 content, and insulin treatment reversed only the H3K9me3 modification." Chromatin immunoprecipitation Model organism in vivo (mouse) Down Western Blot . . . . . ref3469 . . . . . . . . . . DTD0331 SLC38A4 1 Lower level of histone trimethylation of SLC38A4 in retinoic acid receptors (RAR) expression cells (compare with counterpart RAR knockout cells) Lower level of histone trimethylation of SLC38A4 in retinoic acid receptors (RAR) expression cells (compare with counterpart RAR knockout cells) ade EP03552 . . . Histone trimethylation Retinoic acid receptors (RAR) expression cells Histone trimethylation Histone_trimethylation Retinoic acid receptors (RAR) expression cells . Retinoic_acid_receptors_(RAR)_expression_cells tissue tissue Promoter . H3K4 . Increased SLC38A4 transcript levels was associated with decreased promoter CpG-island methylation and increased permissive histone modifications (H3K4me3) in RAR knockout cells. Chromatin immunoprecipitation Multiple cell lines of human Down RT-qPCR . . . . . ref3439 . . . . . . . . . . DTD0028 SLC47A2 1 Lower level of histone trimethylation of SLC47A2 in renal cell carcinoma (compare with adjacent counterpart normal cells) Lower level of histone trimethylation of SLC47A2 in renal cell carcinoma (compare with adjacent counterpart normal cells) ade EP09962 . . . Histone trimethylation Renal cell carcinoma Histone trimethylation Histone_trimethylation Renal cell carcinoma 2C90 Renal_cell_carcinoma tissue tissue Promoter . H3K27 . H3K27me3 might play a repressive role in the expression of SLC47A2 in RCC. Chromatin immunoprecipitation Patients samples of human Down RT-qPCR . . . . . ref3455 . . . . . . . . . . DTD0028 SLC47A2 1 Lower level of histone trimethylation of SLC47A2 in renal cell carcinoma (compare with adjacent counterpart normal cells) Lower level of histone trimethylation of SLC47A2 in renal cell carcinoma (compare with adjacent counterpart normal cells) ade EP09962 . . . Histone trimethylation Renal cell carcinoma Histone trimethylation Histone_trimethylation Renal cell carcinoma 2C90 Renal_cell_carcinoma tissue tissue Promoter . H3K4 . H3K4me3 might play a repressive role in the expression of SLC47A2 in RCC. Chromatin immunoprecipitation Patients samples of human Down RT-qPCR . . . . . ref3455 . . . . . . . . . .